Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1079 ATGCAACACAACATCTTCGCCACAATGCGAAGCTTGAAGATCATGGACGGTTGCAAGGGCACTCAGGTCTACGCCATCAACCCCGCCGGTGGCGCCGGCGGCGCCACCGGCGGAATCGGCGAGAAGCTTCTCCAACAACTCCACGACCATTTCAAAGCCCAATCCCTTAGGACCAAATCTGCTCGGAACATGCAACCTCCGAACGTTACGGCGCCGTCGGAGGCTGTCTTCTCCGACGGGTCACTCCTCCCCTACGGCCTCCCCATGACGGACCTCCTCGAGCCCAAAATTGAACCCTCCCTGATGTCGGTGGACTTCGTCGAAACCCTCGCCGGCGTCCACAGCCGCACCGAGGACCGCCCGCAGTTCGAGCGCTCCGAGGTCTACCTCGAGCAGTGCTCCATCTTCCGCGGGCTGGCCGACCTGAAGCTCTTCCGCCGCAGCCTCCGCGCCGCCCGGCAGCACGCCATTGACGTCCACACCAAGGTCGTGCTCGCCGCGTGGCTGCGCCACGAGCGACGCGAAGACGAGCTGATCGGCTCCTGCTCGATGGACTGCAGCGGGAGGAACCTCGAGTGCCCCCGCGCCTCCCTGACTCCGGGTTACAACCCGGAGTCAGTTTTTGATTACTGCGTGTGCACCCGTGCACACGTAGATGATTATGACAATGATGATGATAATGATAATAATAATGATAATAATGACGATGTTGATGAAGACGATGATGATGCAATGGCCACGGTGGTTGACGAGCAATCCTCCGCCGGGGAGGCAGAGGAAGAGGAGGAGGAGGACAAGGGTGACATGTCATTTTGTGTTGGTGATGATGAGGTTAGGTGTAGTAGGTTCAACATAGCCTCACTTTCAAGGCCCTTTAAGACAATGTTGTATGGTGGATTCTCAGACTCAAGGAGGGAGAAGATTAATTTTTCGCAGAATGGTTTTTCTGTTGAGGCATTGAGGGCTGCTGATGTGTATAGTAGGAGCAAGAGTTTGATCCATTTTGAGCCCAAGGTTGTTCTGGAGTTGCTATCTTTGGCGAACCGGTTTTGTTGCGTGGAGATGAAGAATGCTTGCGACGAGCATTTGGCGTCACTTGTCTGCGACATGGACAACGCCCTGTTGCTTGTTGAGTATGGATTGGAGGAGTTCGCGTACCTGCTGGTGGCGGCCTGCCTGCAGGTGTTTCTCCGGGAGCTCCCTGGTTCATTGCAGAGTTTGAGTGTTGTGAAGATATTTTGCAGTCCAGAGGGTAGGGATAGGCTGGCTCTGGTGGGGCATGCGTCGTTTGTGTTGTATTATTTTTTGAGTCAGATTGCAATGGAGGAAGAGATGAGGTCGAACACCACCGTGATGCTGTTGGAGAGATTAGTGGAGTGTGCAAAGGATGGTTGGGAGAAGCAAACCGCGTATCACCAATTGGGTGTTGTTATGCTTGAGAGAAAAGAATACAAAGATGCACAACATTGGTTCTTGGCAGCGGCGGAGGCAGGTCATGTTTATTCTTTAGTGGGAGTTGCAAGGGCCAAATATAAGCGTGGTCACACGTATTCAGCGTACAAGTTGATGAACACGCTTATTTCTGATCATAAACCAGTTGGGTGGATGTATCAGGAAAGGTCTTTGTATTGTGTCGGGAAGGAGAAATTGATGGACTTGATGTCTGCAACCGAGTTGGATCCAACTCTTTCCTTTCCTTATAAATTCCGGGCTGTTTCATTCCTCGAGGAGAACAAGATTGGACCAGCCATTGCAGAAATCAACAAAATAATCTGCTTCAGGGTTTCTCCAGACTGCCTTGAACTGAGAGCTTGGTTCTTGATTGCGATGGAGGATTACGAAGGAGCCCTCAGGGATGTCCGGGCAATTCTGACGTTGGATCCGAATTACATGATGTTCTATGGGCATATGCATGGTGATCAATTGGTAGAACTTCTCCAACCTGTTGTTCAGCAGTGGAGTCAGGCCGATTGCTGGATGCAGTTGTATGACAGATGGTCCTCTGTTGATGATATTGGTTCTTTGGCTGTTGTACACCAGATGTTAGCAAATGACCCCGGAAAAAGTCTTTTACGCTTTCGGCAATCTCTCCTTCTGCTACGGTTGAATTGTCCAAAGGCTGCCATGCGTAGTTTGCGGCTGGCTAGAAATCATTCTACATCTGACCATGAAAGGCTTGTCTATGAAGGATGGATATTGTATGACACTGGTCATCGTGAAGAAGCATTAGCAAAGGCAGAAGAATCTATTTCTATTCAAAGATCATTTGAAGCGTACTTTCTCAAAGCTTACGCATTAGCCGACTCAAATCTCGATTCAGAGTCCTCAAAGTATGTGATCAGTCTCTTGGAGGAAGCTCTTAGATGCCCTTCTGATGGTCTTCGGAAAGGACAAGCACTGAATAATCTAGGGAGTGTCTACGTAGACTGTGATAAACTGGACCTTGCTGCTGACTGCTACATGAATGCACTCAACATCAAGCATACACGAGCGCATCAGGGGTTGGCACGTGTATATCATCTTAAAAATCATCGCAAAGCAGCATACGATGAGATGACAAAGCTAATAGAAAAGGCCCGGAATAATGCATCGGCTTATGAGAAACGTTCAGAGTATTGTGACCGTGACATGGCAAAGAGTGATCTTAGTATGGCATCAGAATTGGATCCTCTAAGGACTTATCCCTACAGATATAGGGCAGCAGTTTTAATGGACGATCACAAGGAAGCCGAGGCAATAGCAGAACTTTCAAGAGCCATCGATTTTAAACCAGATCTGCAACTATTACATCTCCGAGCCGCATTTTATGACTCCATGGGTGATTTCGATTCCGCAGTCCGGGACTGTGAAGCGGCTCTTTGTCTTGATCCTAGTCATCTCGAGATTCTCGATCTTTGTATTAAAGCACAGGAGCATATTCAAGAACCAAACACAGAATCAGACATTTAA 2949 0.4927 MQHNIFATMRSLKIMDGCKGTQVYAINPAGGAGGATGGIGEKLLQQLHDHFKAQSLRTKSARNMQPPNVTAPSEAVFSDGSLLPYGLPMTDLLEPKIEPSLMSVDFVETLAGVHSRTEDRPQFERSEVYLEQCSIFRGLADLKLFRRSLRAARQHAIDVHTKVVLAAWLRHERREDELIGSCSMDCSGRNLECPRASLTPGYNPESVFDYCVCTRAHVDDYDNDDDNDNNNDNNDDVDEDDDDAMATVVDEQSSAGEAEEEEEEDKGDMSFCVGDDEVRCSRFNIASLSRPFKTMLYGGFSDSRREKINFSQNGFSVEALRAADVYSRSKSLIHFEPKVVLELLSLANRFCCVEMKNACDEHLASLVCDMDNALLLVEYGLEEFAYLLVAACLQVFLRELPGSLQSLSVVKIFCSPEGRDRLALVGHASFVLYYFLSQIAMEEEMRSNTTVMLLERLVECAKDGWEKQTAYHQLGVVMLERKEYKDAQHWFLAAAEAGHVYSLVGVARAKYKRGHTYSAYKLMNTLISDHKPVGWMYQERSLYCVGKEKLMDLMSATELDPTLSFPYKFRAVSFLEENKIGPAIAEINKIICFRVSPDCLELRAWFLIAMEDYEGALRDVRAILTLDPNYMMFYGHMHGDQLVELLQPVVQQWSQADCWMQLYDRWSSVDDIGSLAVVHQMLANDPGKSLLRFRQSLLLLRLNCPKAAMRSLRLARNHSTSDHERLVYEGWILYDTGHREEALAKAEESISIQRSFEAYFLKAYALADSNLDSESSKYVISLLEEALRCPSDGLRKGQALNNLGSVYVDCDKLDLAADCYMNALNIKHTRAHQGLARVYHLKNHRKAAYDEMTKLIEKARNNASAYEKRSEYCDRDMAKSDLSMASELDPLRTYPYRYRAAVLMDDHKEAEAIAELSRAIDFKPDLQLLHLRAAFYDSMGDFDSAVRDCEAALCLDPSHLEILDLCIKAQEHIQEPNTESDI 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1079 982 ProSiteProfiles TPR repeat profile. 926 959 IPR019734 GO:0005515
Aed2g1079 982 Gene3D Tetratricopeptide repeat domain 873 982 IPR011990 GO:0005515
Aed2g1079 982 MobiDBLite consensus disorder prediction 222 241 - -
Aed2g1079 982 MobiDBLite consensus disorder prediction 254 268 - -
Aed2g1079 982 PANTHER ETO1-RELATED 1 975 IPR044631 GO:0010105
Aed2g1079 982 SMART tpr_5 723 756 IPR019734 GO:0005515
Aed2g1079 982 SMART tpr_5 926 959 IPR019734 GO:0005515
Aed2g1079 982 SMART tpr_5 797 830 IPR019734 GO:0005515
Aed2g1079 982 SMART tpr_5 597 630 IPR019734 GO:0005515
Aed2g1079 982 SUPERFAMILY TPR-like 781 963 IPR011990 GO:0005515
Aed2g1079 982 SUPERFAMILY POZ domain 264 364 IPR011333 -
Aed2g1079 982 PANTHER ETHYLENE-OVERPRODUCTION PROTEIN 1 1 975 - -
Aed2g1079 982 Gene3D Tetratricopeptide repeat domain 431 662 IPR011990 GO:0005515
Aed2g1079 982 Gene3D Potassium Channel Kv1.1; Chain A 262 405 IPR011333 -
Aed2g1079 982 SUPERFAMILY TPR-like 679 827 IPR011990 GO:0005515
Aed2g1079 982 MobiDBLite consensus disorder prediction 223 241 - -
Aed2g1079 982 Pfam Tetratricopeptide repeat 798 826 IPR019734 GO:0005515
Aed2g1079 982 Pfam Tetratricopeptide repeat 927 959 IPR019734 GO:0005515
Aed2g1079 982 ProSiteProfiles TPR repeat profile. 797 830 IPR019734 GO:0005515
Aed2g1079 982 SUPERFAMILY TPR-like 469 634 IPR011990 GO:0005515
Aed2g1079 982 Coils Coil 849 869 - -
Aed2g1079 982 MobiDBLite consensus disorder prediction 249 268 - -
Aed2g1079 982 Gene3D Tetratricopeptide repeat domain 691 859 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1079 Aed-Chr2 8704346 8710256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1079 798 961 Glycosyltransferase AT3G04240 29.143 1.37e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1079 - - gmx:100794758 1671.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1079 2 8704346 8710256 Aed2g1079 2 8704346 8710256 ECH
Aed9g2056 9 23806974 23813864 Aed2g1079 2 8704346 8710256 PCT