Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1987 ATGCAAGAAGAGAATGAAGGAGTTGGTCACAGAAACCATCATGGAGGAGTACTAATTGCTCCATTTAATGCAACTCAAGAAGAGAGAATTGCTTGGTTTAGAGGGAGGCTTCACGAGTTCAAGATTCTCAATTCAGATGAGTTGAGTAAACAATTCCATGCTAGGGTTCTTGGATTCTTCAGCCATGAATCATGTGAGTCTCAGTTTTTCATGACTTGGGAGTCCCCTGCAGGCTCATTTGGAGAAAGAGAGTTGCTTTCCATAGAGAGTCTTTTCAAGGTGAATCCCAATGCATGCTTGGTGATTCTATCAAGGACTTTGGACACTATTCATGGCTATAGGACTCTGAAGCCAATTCTTGATGAGGGGTTCAGAGTTCAAGCAGTGACACCAGACTTGAAGTTTCTCTTCAAAGGGACTCCAGCAGAAGCATGGTTGAATGAGTTGAAGAAAGGGAACAAGGACCCTGGTGAGATTTCTCTGTTTCAGAATCTATCTAATTTGATCAGACTTGCAGTTTTGTACAAATATGGAGGTGTGTACCTAGACACAGATTTTATAGTGTTGAAAAGTTTGATTGGATTGAGGAATTGTATTGGAGCACAAAGCATGGATGTTGGGAACAAACACTGGACTAGACTAAACAATGCAGTGCTGATATTTGACATGAATCATCCACTTCTTCTCAGGTTCATTGGTGAGTTTGTGTTGACTTTTGATGGGAGCAAATGGGGGCATAATGGTCCCTACCTTGTTTCAAGAGTGGTGGAGAGGCTTGGGGAAAGGCCAGGCGTCAACTTCACAATCTTGCCTCCTGTGGCTTTTTATCCAACAGATTGGAAAAAGATTGGTGGTCTCTTTAGGAAGCCCAAAACTAGAGGTGATTCAAAATGGGTTGAAGCAAAACTTCTTCAGCTTAGTGGTGAGACTTATGGGGTGCATCTTTGGAACAAAGAAAGTAGGAAATTGAAGATTGAAGAAGAAAGTGTCATAGCAAGACTTATATCTGATCATTGTGTCATTTGCAAGTCTCTGTAG 1038 0.4162 MQEENEGVGHRNHHGGVLIAPFNATQEERIAWFRGRLHEFKILNSDELSKQFHARVLGFFSHESCESQFFMTWESPAGSFGERELLSIESLFKVNPNACLVILSRTLDTIHGYRTLKPILDEGFRVQAVTPDLKFLFKGTPAEAWLNELKKGNKDPGEISLFQNLSNLIRLAVLYKYGGVYLDTDFIVLKSLIGLRNCIGAQSMDVGNKHWTRLNNAVLIFDMNHPLLLRFIGEFVLTFDGSKWGHNGPYLVSRVVERLGERPGVNFTILPPVAFYPTDWKKIGGLFRKPKTRGDSKWVEAKLLQLSGETYGVHLWNKESRKLKIEEESVIARLISDHCVICKSL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1987 345 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 12 344 - -
Aed9g1987 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 68 342 IPR029044 -
Aed9g1987 345 Gene3D - 69 266 - -
Aed9g1987 345 Pfam Glycosyltransferase sugar-binding region containing DXD motif 82 203 IPR007577 -
Aed9g1987 345 Pfam Alpha 1,4-glycosyltransferase conserved region 221 343 IPR007652 -
Aed9g1987 345 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 12 344 IPR044789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1987 Aed-Chr9 23187710 23188747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1987 10 342 Glycosyltransferase AT2G38150 56.287 4.33e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1987 K01988 - gmx:100812965 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1987 9 23187710 23188747 Aed9g1987 9 23187710 23188747 ECH
Aed9g1987 9 23187710 23188747 Aed2g1166 2 9741081 9742364 PCT