Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1166 ATGTTTGTTCATCGGCTGCTTAAACATGTCAAGTTATCTGTCTTCTCTATAATCACTTTCTCTGCTATAATTTTTCTTATCTATGCAGATGGTGTTATCTACCATGATTCTCTACACTCTGCAGCAGCTAATACAGCAACTAATCATAGAACAAAAGAAGGAATGCGGTCAACATCGCTTGTTCGCATACCTTTATGTTCCATTCGAGAGACAGATGAAGCTGATGGTGGTAGAATTCAGAAGGGTCTAGTTGCACCATTGAATGAAGCTGATGGTGGTAGAATTCAGAAGGGTCTAGCTGCACCATTGAATGTCACAGAAAAAGAAAGAATTGCGTGGTTTCAAGAACAGCTGCATAACTTCAAGATCCTCAAGTCGAACAACTTGACCCGGCAATTCCATGCCCGAGTTTTGGGATTTCTCGGCCACAAATGCAAGGCTCAGTTTTTCATGACTTGGATTTCGCCTGCAGGTTTATTTGGAGGGAGGGAACTGCTGTCTGCAGAGAGCATTTTCAAGAACCATCCCGAGGCGTGTCTGATAATTTTGTCGAGGACTCTGGACACCAGACACGGCTACAGGATCCTGAAACCGCTGCTTGATCGTGGGTTCAAAGTGCAGGCAATGGCCCCAGACTTGTCGTTTTTAGTCAAGGGGACTCCGGCTCAAGCTTGGTTTCGTGAGCTTCGGAAGGGAAGAAAGGACCCTGGTGAGATTTCTCTGTCTCAAAATCTGTCTAATCTGATGAGACTAGCAGTTCTCTACAAATATGGTGGTGTCTACATAGACACAGATTTTATAGTTCTGAAACCCTTAACAGGATTAAGGAATTCTATTGGAGCACAGAGCATGACTTCGGGTAAGCACTGGACCAGATTAAACAATGCAGTTCTGATTTTTGATTTTGGACATCCACTTCTGCATAGATTCATCAATGAATTTGCATTAACTTTTGATGGAAACAAGTGGGGGCATAATGGTCCCTACCTGGTTTCCAGAGTGGTTAAGAGGCTGGGGAAAATACATGATTTCAACTTTACAATCATGCAGCCTATGGCCTTTTATCCAGTGGACTGGAACAAGATAAGTGGCTTCTTTATGAAGCCAAAAACTCGGGAAGAATCAAAATGGGTAGAAGCCAAACTGCTTCAGCTCAGTAGAATGACTTATGGGATTCATTTATGGAACAAACATAGCAGCAGATCGACAATTGAAGAAGGAAGTATCATAGGAAGACTTGTATCAGATTATTGTGTCATTTGCAACAATAAGTATAGTTCTTAG 1284 0.4229 MFVHRLLKHVKLSVFSIITFSAIIFLIYADGVIYHDSLHSAAANTATNHRTKEGMRSTSLVRIPLCSIRETDEADGGRIQKGLVAPLNEADGGRIQKGLAAPLNVTEKERIAWFQEQLHNFKILKSNNLTRQFHARVLGFLGHKCKAQFFMTWISPAGLFGGRELLSAESIFKNHPEACLIILSRTLDTRHGYRILKPLLDRGFKVQAMAPDLSFLVKGTPAQAWFRELRKGRKDPGEISLSQNLSNLMRLAVLYKYGGVYIDTDFIVLKPLTGLRNSIGAQSMTSGKHWTRLNNAVLIFDFGHPLLHRFINEFALTFDGNKWGHNGPYLVSRVVKRLGKIHDFNFTIMQPMAFYPVDWNKISGFFMKPKTREESKWVEAKLLQLSRMTYGIHLWNKHSSRSTIEEGSIIGRLVSDYCVICNNKYSS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1166 427 Gene3D - 188 389 - -
Aed2g1166 427 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 427 IPR044789 -
Aed2g1166 427 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 423 IPR029044 -
Aed2g1166 427 Pfam Glycosyltransferase sugar-binding region containing DXD motif 164 283 IPR007577 -
Aed2g1166 427 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 427 - -
Aed2g1166 427 Pfam Alpha 1,4-glycosyltransferase conserved region 300 423 IPR007652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1166 Aed-Chr2 9741081 9742364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1166 116 421 Glycosyltransferase AT5G01250 56.352 1.32e-129 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1166 K01988 - gmx:100781975 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1166 2 9741081 9742364 Aed2g1166 2 9741081 9742364 ECH
Aed9g1987 9 23187710 23188747 Aed2g1166 2 9741081 9742364 PCT