Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1910 ATGGAGGCAGCACGAGTGGGTGTGGCCGTTGAAGGTGGGCATGGAAACAAATCAAACAATGTGAAATTGTTGGAGCAACAGAATACTCAGCAAGCGCAAATTGGAACAGTGTCTCAGCTTCTAGCTGGTGGATTAGCCGGTGCTTTTGCCAAGACCTGCACTGCTCCACTTGCACGCCTCACCATCCTTTTTCAGGTTCATGGTATGCATATTGATGTGGCGACATTGAGCAAGCCTAGCATTTGGGGTGAGGTGTCACGTATTGTCAATGAAGAAGGATTTAGAGCATTTTGGAAAGGGAATTTGGTGACCATAGCTCATCGTCTTCCTTATTCTGCAGTCAACTTCTATGCTTATGAACACTACAAGAATGTAACCTCTTATGATCTTTATATATTATGTGGTGGTTTGTCTGGCATTACAGCTGCTATGGCTACATATCCTTTGGACTTAGTGAGAACACGACTTGCAGCACAGAGAAGTTCCATGTACTACAGGGGCATCTCACATGCTTTTACTACCATTTGCAGAGAAGAAGGGTTCCTGGGTCTCTACAAGGGACTTGGAGCTACATTATTGGGTGTTGGACCCAGTATAGCTATAAGCTTTACTGTTTATGAGGGCTTGCGTTCTTTTTGGAAGTCCCAAAGGCCGGATGATTCTACTGTCATGATCAGTCTTGCCAGTGGCAGTCTCTCAGGAGTTGCATCGTCAACAGCAACATTCCCTTTGGATCTTGTAAGGCGCAGGATGCAGTTGGAGGGTGCCGCTGGTCGAGCACGTGTCTATAATACCAGTTTGTTTGGCACATTCAAGCACATAATTCAGAATGAAGGAGCACGTGGCTTGTACAGAGGCATTTTGCCTGAGTACTTCAAGGTTGTTCCCAGCGTGGGGATTGTCTTTATGACATATGAGACATTGAAGACGTTTCTTTCAGGCACTCCAAGAGATTAG 957 0.4566 MEAARVGVAVEGGHGNKSNNVKLLEQQNTQQAQIGTVSQLLAGGLAGAFAKTCTAPLARLTILFQVHGMHIDVATLSKPSIWGEVSRIVNEEGFRAFWKGNLVTIAHRLPYSAVNFYAYEHYKNVTSYDLYILCGGLSGITAAMATYPLDLVRTRLAAQRSSMYYRGISHAFTTICREEGFLGLYKGLGATLLGVGPSIAISFTVYEGLRSFWKSQRPDDSTVMISLASGSLSGVASSTATFPLDLVRRRMQLEGAAGRARVYNTSLFGTFKHIIQNEGARGLYRGILPEYFKVVPSVGIVFMTYETLKTFLSGTPRD 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1910 318 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 24 316 - -
Aed9g1910 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 311 IPR018108 -
Aed9g1910 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 212 IPR018108 -
Aed9g1910 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 34 125 IPR018108 -
Aed9g1910 318 PANTHER SOLUTE CARRIER FAMILY 25 24 316 - -
Aed9g1910 318 Pfam Mitochondrial carrier protein 221 313 IPR018108 -
Aed9g1910 318 Pfam Mitochondrial carrier protein 34 126 IPR018108 -
Aed9g1910 318 Pfam Mitochondrial carrier protein 132 214 IPR018108 -
Aed9g1910 318 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Aed9g1910 318 PRINTS Mitochondrial carrier protein signature 39 52 IPR002067 GO:0055085
Aed9g1910 318 PRINTS Mitochondrial carrier protein signature 52 66 IPR002067 GO:0055085
Aed9g1910 318 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Aed9g1910 318 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085
Aed9g1910 318 Gene3D Mitochondrial carrier domain 29 314 IPR023395 -
Aed9g1910 318 SUPERFAMILY Mitochondrial carrier 35 308 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1910 Aed-Chr9 22580189 22583580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1910 132 318 Organic Solute Cotransporters AT3G55640 29.000 1.60e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1910 - K14684 gmx:100788060 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1910 9 22580189 22583580 Aed9g1910 9 22580189 22583580 ECH
Aed9g1910 9 22580189 22583580 Aed2g1329 2 12996881 13001334 PCT
Aed2g1147 2 9535611 9542035 Aed9g1910 9 22580189 22583580 PCT