Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1329 ATGGAAGCGCGTGTGGGGATGGTGGTGGAGGGGCCCCAGAGAGCCCTCAACGCCGACGGCGGAGGCGCCGCCGCCGCCGCGAAATTATTGGTGGCGCCGAACAGCCACCAGCTCGGGACGGTGCATCAGCTTCTGGCGGGTGGCATCTCCGGCGCGTTTAGCAAAACCTGCACTGCTCCCCTTGCTCGACTCACTATCCTCTTTCAGGTGCAAGGTATGCATTCTGATGTGGCAGCACTGAGCAACCCTAGCATATTGCGTGAGGCATCACGCATTATAAATGAAGAAGGGTTTAGAGCATTTTGGAAAGGCAATATGGTGACAATTGCTCATCGTCTCCCATATTCTGCAGTCAACTTCTATGCCTACGAACGTTACAAGAATCTATTACATTCACTTATGGGGGAGAAAGCTAGTGGAAATTCAAGTGCTAACCTCCTTGTCCATTTTGTGGGTGGTGGTTTGGCAGGTATAACATCTGCTTCTGCTACATATCCTTTGGATCTTGTGAGAACGCGACTTGCAGCACAGAGAAGTACCATGTACTACAGGGGAATCTCGCATGCTTTTAGTACCATCTGTAGAGATGAAGGTTTCTTGGGTCTGTATAAGGGACTTGGAGCAACATTGTTGGGTGTTGGGCCCAGTATAGCTATTAGTTTTTCGGTTTATGAGTGGTTACGTTCTGTATGGCAGTCACAAAGGCCGGATGATTCTAAAGCTGTGGTTGGTCTTGCTTGTGGCAGCCTTTCAGGAATTGCATCCTCAACAGCAACATTTCCTTTGGATCTCGTAAGGCGTAGGATGCAGTTAGAAGGTGCCGGTGGTCGAGCTCGTGTCTATAACACTGGCTTGTTTGGGACATTTGGGTGCATATTTCAAACCGAAGGGGTCCGAGGTTTGTACAGAGGAATTCTGCCGGAGTACTACAAGGTTGTTCCCGGTGTGGGCATTGTCTTCATGACTTATGAAACATTGAAGATGCTTCTATCAAGCATTTCTAGTTATTAG 1011 0.4906 MEARVGMVVEGPQRALNADGGGAAAAAKLLVAPNSHQLGTVHQLLAGGISGAFSKTCTAPLARLTILFQVQGMHSDVAALSNPSILREASRIINEEGFRAFWKGNMVTIAHRLPYSAVNFYAYERYKNLLHSLMGEKASGNSSANLLVHFVGGGLAGITSASATYPLDLVRTRLAAQRSTMYYRGISHAFSTICRDEGFLGLYKGLGATLLGVGPSIAISFSVYEWLRSVWQSQRPDDSKAVVGLACGSLSGIASSTATFPLDLVRRRMQLEGAGGRARVYNTGLFGTFGCIFQTEGVRGLYRGILPEYYKVVPGVGIVFMTYETLKMLLSSISSY 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1329 336 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 335 - -
Aed2g1329 336 PRINTS Mitochondrial carrier protein signature 248 270 IPR002067 GO:0055085
Aed2g1329 336 PRINTS Mitochondrial carrier protein signature 159 177 IPR002067 GO:0055085
Aed2g1329 336 PRINTS Mitochondrial carrier protein signature 104 124 IPR002067 GO:0055085
Aed2g1329 336 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Aed2g1329 336 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Aed2g1329 336 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Aed2g1329 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 239 329 IPR018108 -
Aed2g1329 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 129 IPR018108 -
Aed2g1329 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 144 230 IPR018108 -
Aed2g1329 336 Gene3D Mitochondrial carrier domain 34 332 IPR023395 -
Aed2g1329 336 PANTHER SOLUTE CARRIER FAMILY 25 1 335 - -
Aed2g1329 336 SUPERFAMILY Mitochondrial carrier 38 326 IPR023395 -
Aed2g1329 336 Pfam Mitochondrial carrier protein 38 131 IPR018108 -
Aed2g1329 336 Pfam Mitochondrial carrier protein 145 232 IPR018108 -
Aed2g1329 336 Pfam Mitochondrial carrier protein 240 331 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1329 Aed-Chr2 12996881 13001334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1329 1 333 Organic Solute Cotransporters AT2G37890 66.467 3.56e-163 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1329 - K14684 gmx:100777563 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1910 9 22580189 22583580 Aed2g1329 2 12996881 13001334 PCT