Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1854 ATGGTAATGCAGAAGAGGTTGAACTATGGTTTTAATGGCTATCAAGTGCCTGTCATTCCTAGAGCTTCAAGGTCAGCTAGGGGAAGGGGCACAATTAGGAAGAAACCTGACAGCAACCAGATACAGGCTTTTGAAATCTTGGCTAGTGTAGCCGGCAACTTTCTACAGGAGAGTGAGAGTTCCGGTCTTGACAATGTCGCGCCTGCAAAAGATCCTCACGCTTTCTCTGGCCAAGGACAAAATATCCTTGAGAGGGAAGTTGAAAGGATAAAAGGGAGAAGTGTAAATGGGAAAACCATCCATATTAAAGGATGCTCTGATGGTTTAATAGAACCTGGCCACAAAGTATCTAAAGTTTGCAGTTCAGAAAATAATAATGTGGAAAAGACATCGTTGGAAGGTCACAAGCATCTTGATTCTTTTCCCAATGGTTTCACTTCTTCTAGGAAATTAGTTAATAGAGATGATGACGAAAATTTAGTTAGGTGCACTCAACTGAACTCCAAGATTAAGACATCTGGCGCGCCACCAGATATGCCAAAATTGAAGGATGCAAGTCCTTTTATGAGTGATGAGAACAGCAGTAGGGACATTTCTGAACTTGAAAATTTACAAAGGATGTATCCATTTAAGAAGAGGAAGTACTTCAATCAGAGCTCATCATCTACATCTGATAGGGGGTCTCAATGTCAAGGCATGTTTGATTATTCTGACACCACCAGAGTTAATGGCACAAACCATGCAATTGAAGAATCATCCTCTATTGCTGGTCAACAAGTGCATTCTGGATCCAGGGGTTGTAATGTGAAGCTTAGCATAAAATCCTTTAAAGTGCCAGAGCTTTTTATTGATATACCTGAAACTGCAACTATTGGTTCACTGAAAGTAAATACTTCAGCTAACAATAACATGTCAAAGTGTCGCACTCTGGTGGCTGTTCCTGCCATTAACATGGAGGCATTGGCTGTGGTTCCATTCCGCCGCAAATCTGGGAATCCAGACTTTGCACCACGCCGAATTAGGAGGCCATTCTCTGTTCTAGAAGTAGAAGCATTGGTTCAGGCTGTCGAAAAACTTGGAACTGGAAGAATCTCCCCTCAGCAAAGGAGGGGAGAACCTGTTCCTCAGGAGCTTCTGGACAGGGTCTTAGCTGCTCATGCTTATTGGTCTCAACAACAGTGGAATATGGTGTCACTCATACCATTCCTTGTGGTCGATTGTTGGTAA 1227 0.4262 MVMQKRLNYGFNGYQVPVIPRASRSARGRGTIRKKPDSNQIQAFEILASVAGNFLQESESSGLDNVAPAKDPHAFSGQGQNILEREVERIKGRSVNGKTIHIKGCSDGLIEPGHKVSKVCSSENNNVEKTSLEGHKHLDSFPNGFTSSRKLVNRDDDENLVRCTQLNSKIKTSGAPPDMPKLKDASPFMSDENSSRDISELENLQRMYPFKKRKYFNQSSSSTSDRGSQCQGMFDYSDTTRVNGTNHAIEESSSIAGQQVHSGSRGCNVKLSIKSFKVPELFIDIPETATIGSLKVNTSANNNMSKCRTLVAVPAINMEALAVVPFRRKSGNPDFAPRRIRRPFSVLEVEALVQAVEKLGTGRISPQQRRGEPVPQELLDRVLAAHAYWSQQQWNMVSLIPFLVVDCW 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1854 408 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 361 394 - -
Aed9g1854 408 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 297 363 - -
Aed9g1854 408 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 77 - -
Aed9g1854 408 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 75 295 - -
Aed9g1854 408 PANTHER TELOMERIC REPEAT BINDING PROTEIN 361 394 IPR031105 -
Aed9g1854 408 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 77 IPR031105 -
Aed9g1854 408 PANTHER TELOMERIC REPEAT BINDING PROTEIN 297 363 IPR031105 -
Aed9g1854 408 Gene3D - 365 399 - -
Aed9g1854 408 Gene3D - 331 364 - -
Aed9g1854 408 PANTHER TELOMERIC REPEAT BINDING PROTEIN 75 295 IPR031105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1854 Aed-Chr9 22159127 22163560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1854 - - gmx:100801280 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1854 9 22159127 22163560 Aed3g2073 3 24668956 24674527 ECH
Aed9g1854 9 22159127 22163560 Aed9g1854 9 22159127 22163560 ECH
Aed9g1854 9 22159127 22163560 Aed1g1230 1 11791128 11794190 ECH