Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2073 ATGGTGTTGAAGAAGAGGCTTGATTATGGATTCAGGGGCTTTCAGGTCCCTGTTATACCTAGACATCCTAGATCTGCAAGATTTGAAATTGTTCAGAGGAGGGTTCCTTTCAAGAAATCAGCTGAGGATGGCCAAGCTTGCGCTTTTGAACTATTGGCATCTTTAGCCGGGAAGTTGTTGCAGGAGAGAGAAAGTTCTGCTTCTAGCAATGCATCAGAAGGAAATCATCAGCTAGCCTTTAACCAATGTGTTGTTGAGCAGGAAAGGCGTAGTGAAGTTAATACTGGAAGTTGTGAAGAGAGTATTTTTACGACTGAGGTGGGCTCACGAAAGAGTGGTGAGAAATCCCTTGAGTGTGTTGAGACTGATAGTGTATTAGAATCCGTTTCAGCTAAAAATAATTCTGACTGTTGGGAGAAAATCAAAGCTGATGTGAAGTCAGAAATTTTCAAATGGGAGACTAAGTTTGGACATCATTCTAATAGATTGGTAGAAATACCCGAAGATCAAGAGGCTGGCAATTCAGCCTTCAAGGGATTATCTTCGGGTAAAAAAGTTACTTTGAATGATCCATTGGAGTTGTGCATTAACTCTCCTGCACTAGTTAACTCGAACAGTGATGTTAAATCTCCATTTGATAGGGAACCGTTTCCCCATGCTTCCTTTTCTGGGCATGTGAATGATATTAAGTTAGGTTTTATTGATGATGACGAAAACTTTATAAGGTGCAACAAAGTTTGCACCAAGTCGAAAGCATTTAGACCTCAACAATGCATTTCACAGTTGACTTCCAAATCCTGGAAGGTTGCTCCAAAGTTGAAGGACTGTGACCACTCTAGATCTGATGAGGGAGTAAAAACTCTAAATCGTAAGAGGAAGACTTGTTACAGTTTTGAAAGGCCTCAGCATTGTGGTCTTTTCAAGCGTAAGAAATTCTTTGACAGGGGTTCTGTGGTAACTTCCAATGGAGGATTCAGCAGTGACAGTGTATCTGATTCACGTGAGAAAGGAGTTGATGGAGATAACCCTAGCTCACCTGGAAAATTGCAAGAATCTAAGGATTCTCATGTTAAGTTTAGCATCAAGTCATTCAGGATACCAGAACTTTATGTTGAGATTCCTGAAATTGCTACTGTTGGTTTGTTAAAGAGGACAGTCATGGAGGCAGTGATGACTATACTTGGAGGTGGACTGCATGTTGGTGTTCTTGTTCAGGGGAAAAAAGTAAAAGACGATGACAAAACTCTTCTTCAGACTGGTGTATCTTGTAAAGAAAATCTGGATAAACTCGGTTTCATGTTGGAGCCCAGTTCTTTTCAAGCATCTCCAACTGTTTGTGTTGGAGATCCTTCTCAATGTGAAACACCCCAGCCTTCCAGAGTACTGGTTGCTGTTCCAGATAGGAGTACAGAAGCATTAGCTCTTGTTCCTGTGAATCAGAAAACCAAGCGCTCTGAGCTTGTACAGCGTCGAACTAGGAGACCATTTTCTGTGTCTGAGGTAGAAGCACTTGTTCAGGCAGTTGAGGAACTTGGAACTGGAAGGTGGCGTGATGTAAAGTTGCAAGCTTTTGAAAGTGCAGACCATAGGACTTACGTCGATTTAAAGGATAAATGGAAAACATTAGTACACACTGCAAAAATCTCCCCTCAACAAAGGAGAGGGGAGCCAGTCCCCCAGGAGCTATTGAACAGGGTTTTGGCTGCCCATGCATACTGGTCTCACCACCAAGCCAAGCATCAAGCTGCAACCATGATGAAGATCACAGAAGTCTGA 1776 0.4223 MVLKKRLDYGFRGFQVPVIPRHPRSARFEIVQRRVPFKKSAEDGQACAFELLASLAGKLLQERESSASSNASEGNHQLAFNQCVVEQERRSEVNTGSCEESIFTTEVGSRKSGEKSLECVETDSVLESVSAKNNSDCWEKIKADVKSEIFKWETKFGHHSNRLVEIPEDQEAGNSAFKGLSSGKKVTLNDPLELCINSPALVNSNSDVKSPFDREPFPHASFSGHVNDIKLGFIDDDENFIRCNKVCTKSKAFRPQQCISQLTSKSWKVAPKLKDCDHSRSDEGVKTLNRKRKTCYSFERPQHCGLFKRKKFFDRGSVVTSNGGFSSDSVSDSREKGVDGDNPSSPGKLQESKDSHVKFSIKSFRIPELYVEIPEIATVGLLKRTVMEAVMTILGGGLHVGVLVQGKKVKDDDKTLLQTGVSCKENLDKLGFMLEPSSFQASPTVCVGDPSQCETPQPSRVLVAVPDRSTEALALVPVNQKTKRSELVQRRTRRPFSVSEVEALVQAVEELGTGRWRDVKLQAFESADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLAAHAYWSHHQAKHQAATMMKITEV 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2073 591 CDD SANT_TRF 494 544 - -
Aed3g2073 591 MobiDBLite consensus disorder prediction 324 354 - -
Aed3g2073 591 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 489 547 IPR017930 -
Aed3g2073 591 ProSiteProfiles Myb-like domain profile. 488 543 IPR001005 -
Aed3g2073 591 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 461 - -
Aed3g2073 591 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 458 582 - -
Aed3g2073 591 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 461 IPR031105 -
Aed3g2073 591 PANTHER TELOMERIC REPEAT BINDING PROTEIN 458 582 IPR031105 -
Aed3g2073 591 SMART sant 492 545 IPR001005 -
Aed3g2073 591 Gene3D - 481 585 - -
Aed3g2073 591 SUPERFAMILY Homeodomain-like 494 574 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2073 Aed-Chr3 24668956 24674527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2073 - - lang:109356744 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1854 9 22159127 22163560 Aed3g2073 3 24668956 24674527 ECH
Aed1g1230 1 11791128 11794190 Aed3g2073 3 24668956 24674527 ECH
Aed3g2073 3 24668956 24674527 Aed3g2073 3 24668956 24674527 ECH