Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1723 ATGACTGTAGAAGGAGATGGACTTCTGAAGCAGCAAAAGAAAAAACAGAATTTACAGAGAGAAAAAGAAAAAAAAAAAGAGAATTGTCAAACATTACCGGTGTCCCCGCAACAGTCTCATGTTCCGAAGTTTGGCAATCGGGAGAATGAAGAGGATGTTTCAGATATAGCTTATTCTCACAAAGTCAAGCAAGGTCAACCTGGTTCAAAGATGATTAATCCAAATGACAGCAAGGAAAATTCAGATGTAGTTTCTTCTGCTGACCTACCCCATTCAAAACCCAGAGTTCATTCAGAGGATCCATCTGGAAAGGGATCAGTGAGGTCAGTACACGAGTTACAAAAGAGTAGGGAGGATGGTGATCCTAAACAGTTTACTGACTCTCCAGTTCGCCATGGTGGTGGTGATTCCGCCCATCGAGGTCACGGAGTAGGTTCTGCCGACAACCGTAGAAGACCTTCAAGGCAACCTACTGGGTCTGAGCACAGCATCGACCGTTCACCCCTCCATCGCCATGCGAAAACCCCTGGCAGAGATAGCCCTTCTTGGGAAGGAAAAAATTCACATGACAGCAGCCATGGTACCCCAGGAAGGTCCCGATTAAGACCGTCTAATCGAGGGGATGAAACTCCTGATAAAGGTGCTGCTATTCCAAAGTTTGGTGATTGGGATGAGAGCAACCCTGCAGCAGCTGATGGTTACACTCACATTTTCAACAAACTGCGGGAGGAGAAACAGGAGGGGGCCGGACATGTGCCAGGCACACCTAATGGGAGACAATATGCTGCTCGGAACCAACCTGCCGACGACAAAGCTCAGAGTTGCTGCTTTTTCTGGGGGAAAAAATGA 849 0.4723 MTVEGDGLLKQQKKKQNLQREKEKKKENCQTLPVSPQQSHVPKFGNRENEEDVSDIAYSHKVKQGQPGSKMINPNDSKENSDVVSSADLPHSKPRVHSEDPSGKGSVRSVHELQKSREDGDPKQFTDSPVRHGGGDSAHRGHGVGSADNRRRPSRQPTGSEHSIDRSPLHRHAKTPGRDSPSWEGKNSHDSSHGTPGRSRLRPSNRGDETPDKGAAIPKFGDWDESNPAAADGYTHIFNKLREEKQEGAGHVPGTPNGRQYAARNQPADDKAQSCCFFWGKK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1723 282 MobiDBLite consensus disorder prediction 66 87 - -
Aed9g1723 282 MobiDBLite consensus disorder prediction 8 29 - -
Aed9g1723 282 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 36 279 IPR040387 -
Aed9g1723 282 MobiDBLite consensus disorder prediction 133 219 - -
Aed9g1723 282 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 36 279 - -
Aed9g1723 282 Coils Coil 8 28 - -
Aed9g1723 282 MobiDBLite consensus disorder prediction 1 230 - -
Aed9g1723 282 MobiDBLite consensus disorder prediction 247 270 - -
Aed9g1723 282 MobiDBLite consensus disorder prediction 92 126 - -
Aed9g1723 282 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 211 246 IPR008700 -
Aed9g1723 282 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1723 Aed-Chr9 20683926 20688276 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1723 K13456 - gmx:100499220 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1723 9 20683926 20688276 Aed2g1508 2 17842483 17845456 PCT