Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1508 ATGTTGAATATTGTAATCTCTTTTCAATTTGATATATTTTGTCCTAGCATCTGGTGTACGGGCATACCTGACCTTAAGGCAGAATTTCAGCAACGCTCTCATGTACCAAAATTTGGCAATTGGGACAGTGGAGAGAATGTTCCTTACACAGCATATTTTGACAAGGCGCGAAAAGGCCGAACCGGTGCAAGGATAATAAATCCAAATGACCCTGAGGAGAATGCTGATTTGAGTCTTGAAAATCCATCATCTGATAACCTACCACCTCCTTCCAGACCCAGAGCCAACTCAGAGGATCAAACCAGAAAAGGATCGCTGCATTCGGAAGACGATCCTAAGCATTTCGTCGACTCTCCGGCTCGCCATGACAATGCAAGCAGTAGGAGTGGCAGCAGAAGCCATGGAGGAGTAGGTGCTGCTGCTGATAACCGTAGGAGACAGAGTACTGGCTCTGAGTACAGCATCGAACGTTCACCACTTCATCGCCAGGCTAAGGCCCCGGGCAGAGACAGTCCCCAGTGGGAACCAAAGAATTCGTATGACAGCAGCCAGGGAACACCAGGGAGATCCCGGTTGAGACCGGCTAATCGGGGAGACGAAACAGTTATGTTGCTGCTTTGCTTGGGGGGGCAAAAAATGATTTCTTGGTTTGCAAGTGTGAATGATGATGATATTCTGAACAAAAAATGA 690 0.4739 MLNIVISFQFDIFCPSIWCTGIPDLKAEFQQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENADLSLENPSSDNLPPPSRPRANSEDQTRKGSLHSEDDPKHFVDSPARHDNASSRSGSRSHGGVGAAADNRRRQSTGSEYSIERSPLHRQAKAPGRDSPQWEPKNSYDSSQGTPGRSRLRPANRGDETVMLLLCLGGQKMISWFASVNDDDILNKK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1508 229 MobiDBLite consensus disorder prediction 74 95 - -
Aed2g1508 229 MobiDBLite consensus disorder prediction 62 196 - -
Aed2g1508 229 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 30 201 IPR040387 -
Aed2g1508 229 MobiDBLite consensus disorder prediction 96 121 - -
Aed2g1508 229 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 31 60 IPR008700 -
Aed2g1508 229 MobiDBLite consensus disorder prediction 175 190 - -
Aed2g1508 229 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 30 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1508 Aed-Chr2 17842483 17845456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1508 K13456 - gmx:100808509 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1723 9 20683926 20688276 Aed2g1508 2 17842483 17845456 PCT