Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1628 ATGGCTATGGGGTTGAGACATGGGCCCGCGGGGAGCCGCTACCGCGGGTGCTATCGGCAGGGATTGAGGCATGGGTTTGGGGTGTATAGGTTCTACACCGGGGATGTTTACGCTGGGGAGTGGTCTAATGGACAGAGCCATGGCTGTGGGGTCCACACGTGCGAGGATGGGAGTCGCTACGTTGGGGAGTTTAAGTGGGGGGAAATGGAGATACATATGCGGGTGAATACTTATGCGGACAAGATGCATGGTTTTGGCATATATCGTTTTGCGAATGGCCATCGTTATGAAGGAGCCTGGCATGAAGGCAGAAGACAAGGACATGGAATGTATACATTTAGAAATGGCGAAACCCAATCTGGTCACTGGCAAAATGGAGTCCTTGACGTTCCAGGCACACAGAACCCCACTTCTCCAGTTTCTCCTGTTGGTGTCTATCCTTCCAAAGTAGTCAATGCGGTGCAGGAAGCAAGACGAGCCGCAGAGAAAGCCTATGATGTGGCTAAGGTAGATGAAGGGGTGAACAGAGCATTAGCAGCTTCTAATAGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTGAAAGCTGTGCAAAAGCAGAATTATCATGTTAGCGGTGAAAGCTTCTCAATTCCCGTTGTGTAA 642 0.5078 MAMGLRHGPAGSRYRGCYRQGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGEMEIHMRVNTYADKMHGFGIYRFANGHRYEGAWHEGRRQGHGMYTFRNGETQSGHWQNGVLDVPGTQNPTSPVSPVGVYPSKVVNAVQEARRAAEKAYDVAKVDEGVNRALAASNRAANAARVAAVKAVQKQNYHVSGESFSIPVV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1628 213 Pfam MORN repeat 37 59 IPR003409 -
Aed9g1628 213 Pfam MORN repeat 14 36 IPR003409 -
Aed9g1628 213 Pfam MORN repeat 80 95 IPR003409 -
Aed9g1628 213 Pfam MORN repeat 96 117 IPR003409 -
Aed9g1628 213 Pfam MORN repeat 121 133 IPR003409 -
Aed9g1628 213 PANTHER - 10 204 - -
Aed9g1628 213 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11 70 - -
Aed9g1628 213 SMART morn 58 92 IPR003409 -
Aed9g1628 213 SMART morn 94 115 IPR003409 -
Aed9g1628 213 SMART morn 12 33 IPR003409 -
Aed9g1628 213 SMART morn 35 56 IPR003409 -
Aed9g1628 213 Gene3D - 16 78 - -
Aed9g1628 213 Gene3D - 79 141 - -
Aed9g1628 213 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 10 204 - -
Aed9g1628 213 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 76 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1628 Aed-Chr9 19586054 19590056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1628 2 156 Acyl Lipid Metabolism Gene Families AT2G41210 33.548 3.20e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1628 - - gmx:102667330 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1718 2 21794694 21799772 Aed9g1628 9 19586054 19590056 PCT