Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1718 ATGCATCAGAAGAAATCCGAAGTCCAGATCGGAAAAGAAAGCACCGGCGTCTCTTCCGATTTCAACCACCACCCGAACCTAGCTCCGAACCCGAACCAAAACCAAGACGCTCTTCTCTCTCCCCAATCCACCGCACCTTACAAGAGACCCTCCCTCACCCTCTCCAAATCCCCAACCCTCCACAGATTCCCAACCCCAACCCCCAAACCGCGGCACGTCACCACCACCACCACCACCACAACAACAACAACAACAATTCTCTCCGCCGCGGTTTCCCTCCGCCGCCGTCTCCGCCTCTTCCTCTTCCTCTCGCTCCCCTTCTTCTACTTCCTCGTCTCCCACCCCACCAACTCCCTCCTCCTTGACTTCCTCTCCGCCTTCTCCTTCTCCGCCGCGCTCCTCTTCTCTCTCAACCTCGCCCTCCCCAAAATCCCCTCCCTCCGCCTCTTCCTCAGCCTCAGGCCCAAGGCCCGCCCCGCCCTCAGCCTCCCCGTCTTCTGGACCGCCTCCACCCGAAAAGCCCATCACCAGGCCCATCCCCATCCCCAGCCCGCGGGCTTCTGCCTCTCCGTGGTGGCCTACTCGAACGGGGACGTCTACGAGGGGGAGCTGAAGGGAGGCAAGTGCTGCGGGGGCGGCGTCTACTATTACAGCATGAGTGGGCGGTACGAGGGCGACTGGGTGGATGGCAAGTATGATGGCTGCGGGGTGGAGACGTGGGCCCGGGGGAGCCGGTACCGAGGGCAGTACCGCCGGGGGCTACGGCACGGCTTCGGGGTGTACCGGTTCTACACCGGGGACGTCTACGCCGGGGAGTGGGCCAGTGGCCAGAGCCATGGATGTGGGGTTCACACGTGCGAGGATGGGAGCCGAAATGGTGATACATATGCTGGTGAATACTTTGCGGATAAGATGCATGGGTTTGGGGTATATAGTTTTGCAAATGGCCATCGTTATGAAGGATCCTGGCATGAAGGAAAAAGGCAAGGTCTTGGAATGTATACATTTAGCAATGGAGAAACCCAGTCTGGTCACTGGCAAAATGGAATCCTTGACATTCCAAGCACACGGAGTGCCACCTATCCTGTTTCTCCTGTTGGTGTCAATCATTCCAGAGTACTTAATGCAGTGCAGGACGCAAGAAGGGCAGCTGAGAAGGCCTATGATGTGGCCAAGGTAGATGGACGGGTGAAAGAAGCAGTAGCAGCCGCTAACAGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTCAAGGCTGTGCAAAACCAAATGCATCATAACGTTAACAGCACGAGCATCTCAATTCCCATCATGTGA 1314 0.5769 MHQKKSEVQIGKESTGVSSDFNHHPNLAPNPNQNQDALLSPQSTAPYKRPSLTLSKSPTLHRFPTPTPKPRHVTTTTTTTTTTTTILSAAVSLRRRLRLFLFLSLPFFYFLVSHPTNSLLLDFLSAFSFSAALLFSLNLALPKIPSLRLFLSLRPKARPALSLPVFWTASTRKAHHQAHPHPQPAGFCLSVVAYSNGDVYEGELKGGKCCGGGVYYYSMSGRYEGDWVDGKYDGCGVETWARGSRYRGQYRRGLRHGFGVYRFYTGDVYAGEWASGQSHGCGVHTCEDGSRNGDTYAGEYFADKMHGFGVYSFANGHRYEGSWHEGKRQGLGMYTFSNGETQSGHWQNGILDIPSTRSATYPVSPVGVNHSRVLNAVQDARRAAEKAYDVAKVDGRVKEAVAAANRAANAARVAAVKAVQNQMHHNVNSTSISIPIM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1718 437 SMART morn 198 219 IPR003409 -
Aed2g1718 437 SMART morn 267 288 IPR003409 -
Aed2g1718 437 SMART morn 317 338 IPR003409 -
Aed2g1718 437 SMART morn 244 265 IPR003409 -
Aed2g1718 437 SMART morn 221 242 IPR003409 -
Aed2g1718 437 SMART morn 294 315 IPR003409 -
Aed2g1718 437 Pfam MORN repeat 269 291 IPR003409 -
Aed2g1718 437 Pfam MORN repeat 296 318 IPR003409 -
Aed2g1718 437 Pfam MORN repeat 223 245 IPR003409 -
Aed2g1718 437 Pfam MORN repeat 319 340 IPR003409 -
Aed2g1718 437 Pfam MORN repeat 246 268 IPR003409 -
Aed2g1718 437 Pfam MORN repeat 200 220 IPR003409 -
Aed2g1718 437 Gene3D - 202 251 - -
Aed2g1718 437 Gene3D - 252 301 - -
Aed2g1718 437 Gene3D - 302 365 - -
Aed2g1718 437 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 98 427 - -
Aed2g1718 437 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 292 352 - -
Aed2g1718 437 MobiDBLite consensus disorder prediction 1 80 - -
Aed2g1718 437 PANTHER - 98 427 - -
Aed2g1718 437 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 194 290 - -
Aed2g1718 437 MobiDBLite consensus disorder prediction 10 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1718 Aed-Chr2 21794694 21799772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1718 239 352 Acyl Lipid Metabolism Gene Families AT1G60890 31.579 8.39e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1718 - - gmx:100784010 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1718 2 21794694 21799772 Aed9g1628 9 19586054 19590056 PCT