Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1220 ATGGGGCACAAGAACACAATTTTCTTGGCACTGATAATTGTTGCTTTGATCACAAAGGAGGTCATGGCAGAGCAACATGTAGTTGGTGGAAGCCAAGTTTTCAAGTACTCTTCTTTGCATAGTGTGGTCGAACTAGGTAGTGAGAGTGAGTACAAGAGATGTGATATTGGCAATGCTGTGAAGTCAATGAGCAGTGGCAATGATGCTGTGAAACTGAACAAGCCTGGCACGCGTTACTTTGCATGTGGCACAATAGGCCATTGTGATCAAGGCATGAAGGTGAAGATCATAACATCATCATCATCTTCTTCACCTACTTCATCATCTTCAGCCTCACAATGCCTCATCTCTCTTGTGCTCATTGTTGCATTGTTTATTGCTTCTCTATCTGCTTAA 396 0.4268 MGHKNTIFLALIIVALITKEVMAEQHVVGGSQVFKYSSLHSVVELGSESEYKRCDIGNAVKSMSSGNDAVKLNKPGTRYFACGTIGHCDQGMKVKIITSSSSSSPTSSSSASQCLISLVLIVALFIASLSA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1220 131 Pfam Plastocyanin-like domain 25 92 IPR003245 GO:0009055
Aed9g1220 131 Gene3D - 17 112 IPR008972 -
Aed9g1220 131 SUPERFAMILY Cupredoxins 24 97 IPR008972 -
Aed9g1220 131 ProSiteProfiles Phytocyanin domain profile. 1 100 IPR003245 GO:0009055
Aed9g1220 131 PANTHER BNAA06G32330D PROTEIN 33 108 - -
Aed9g1220 131 CDD Phytocyanin 27 96 - -
Aed9g1220 131 PANTHER BLUE COPPER PROTEIN 33 108 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1220 Aed-Chr9 9505257 9505958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1220 5 96 Miscellaneous Gene Families AT3G27200 50.000 1.46e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1220 - - gmx:100305865 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1220 9 9505257 9505958 Aed9g1220 9 9505257 9505958 ECH
Aed3g1237 3 10971195 10972748 Aed9g1220 9 9505257 9505958 PCT