Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1237 ATGGGGCACAAGAACACAATTTTCTTGGCACTGGTAGTGGTAGCTACCTTGATTGCAAAGGAGGCCTTTGCAGCACAACATGTAGTTGGTGGAAGCCAAGGCTGGGATCAATCCACAAACTTTAAGTCATGGACTTCAGGCCAAACATTCAAGGTTGGAGATAAACTTGTTTTCAAGTACAGTTCTTTGCATAGTGTGGTTGAGCTAGGCAGCGAGAGTGCCTACAAGAATTGTGATATTAGCAGTCCAGTGCAGTCCTTGAGCACTGGCAACGATGTTGTAAAACTCGACAAGCCAGGTACGAGGTACTTCACTTGTGGTACCTTGGGTCACTGTAGTCAAGGGATGAAGATGAAGATTACCATAGGAAAAGTGAATGCTCTTTCCCCTGCATCGTCACCGTCGTCGTCACTGGCATCGCCATCGTCATCGTCATCTTCTTCTTCTCCTACTACTATTGATGCATCTTCAGCCTCACAACGCTTCACCTCTTTTGGGCTCCTTGTTGTTGCATTATCGGTCACCATAATGATTTCTTTGTTTTAA 546 0.4542 MGHKNTIFLALVVVATLIAKEAFAAQHVVGGSQGWDQSTNFKSWTSGQTFKVGDKLVFKYSSLHSVVELGSESAYKNCDISSPVQSLSTGNDVVKLDKPGTRYFTCGTLGHCSQGMKMKITIGKVNALSPASSPSSSLASPSSSSSSSSPTTIDASSASQRFTSFGLLVVALSVTIMISLF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1237 181 ProSiteProfiles Phytocyanin domain profile. 25 124 IPR003245 GO:0009055
Aed3g1237 181 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
Aed3g1237 181 SUPERFAMILY Cupredoxins 24 122 IPR008972 -
Aed3g1237 181 CDD Phytocyanin 25 122 - -
Aed3g1237 181 PANTHER BLUE COPPER PROTEIN 9 146 IPR039391 GO:0009055
Aed3g1237 181 Gene3D - 23 127 IPR008972 -
Aed3g1237 181 PANTHER BNAA06G32330D PROTEIN 9 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1237 Aed-Chr3 10971195 10972748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1237 5 122 Miscellaneous Gene Families AT3G27200 63.559 2.24e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1237 - - gmx:100306337 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1237 3 10971195 10972748 Aed9g1220 9 9505257 9505958 PCT