Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1172 ATGGATGATGAATATGCTAAGCTTATTAGAAGGATGAACCCACCAAGGGTTGTGATTGACAACAATGCCAGTGAAAACGCCACTGTTATTCAGGTTGACAGTGTCAACAAACATGGGATTCTCCTGGATGTTGTCCAAGTTTTATCAGATATGAACCTTGTAATAACAAAGGCCTACATCTCCTCTGATGGGGTGTGGTTCATGGATGTGTTTAATGTGATTGATCATAATGGAAACAAGATCAGAGATAAGGAAGTCATTGATTATATTCAGAGGAGACTTGAAAACAATCCCAGCTTTGCACCCTCAATGAGAGAATCTGTTGGAGTAGTACCTACCGAAGAGCACACCGTGATTGAACTCACTGGCACAGACCGGCCGGGGTTACTATCTGAAATCTGTGCAGTCCTCACAGACCTTCACTGCAATGTGGTGACTGCTGAGATATGGACACACAACACCAGAGCTGCGGCCGTAGTTCATGTGACAGACGATTCCAGTGGCTGTGCCATCAAGGATCCATCTCGCCTCACTACGATAAGGGACTTGCTTTCTAATGTCCTAAGGGGGAGCAATGATCCAAAGACAGCAAGGACAATACTTTCACCCCCTGGTGTTACAAATAGGGACAGAAGATTGCATCAGATTATGTTTGCTGATAGGGATTATGAGAGGATTGAAAGAGCAGGACGAGGGGGACTTAGAGATATAGATAAACGCCCTCTCCCTCATGTAACTGTTGTGGATTGTGTTGAGAAAGATTACACTGTGGTTACCATGAGAGCAAAAGATCGACCGAAGTTGTTGTTTGATATTGTTTGCACTTTAACTGACATGCAGTATGTTGTTTTTCATGGTGTTGTCAAGACATTAAGGACAGAAGCTTTTCAGGAATTTTATATCCGGCATGTTGATGGCTTTCCCATAAGTTCAGAGGCAGAGCGCGAACGCCTCGTGCAGTGTCTGGAAGCAGCAATTGAAAGGAGAGCATCTGAGGGAATGGAGCTGGAGTTGTGCACAGAAGATCGCGTAGGACTCCTCTCAGATATCACAAGAATATTTCGTGAAAACAGTTTATGCATCAAAAGAGCAGAGATATCAACAGAAGAAGGAAAGGCAAGGGATACTTTTTATGTCACAGATGTTACTGGTAACCCAGTTGACCCCAAGATTATAGATTCAATTCGCAGACAGATTGGTGACAAAGTACTAAAAGTAAAACATAACACTAATCTTTCACCAAAGCCCTCTTCTCCACCAACAACCATTGGATTTCTCTTTGGAAATTTTTTCAAAGCTCGATCTTTTCAGAATTTTAAGTTGATCAGATCTTATTCTTGA 1341 0.4251 MDDEYAKLIRRMNPPRVVIDNNASENATVIQVDSVNKHGILLDVVQVLSDMNLVITKAYISSDGVWFMDVFNVIDHNGNKIRDKEVIDYIQRRLENNPSFAPSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLTTIRDLLSNVLRGSNDPKTARTILSPPGVTNRDRRLHQIMFADRDYERIERAGRGGLRDIDKRPLPHVTVVDCVEKDYTVVTMRAKDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAFQEFYIRHVDGFPISSEAERERLVQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNTNLSPKPSSPPTTIGFLFGNFFKARSFQNFKLIRSYS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1172 446 CDD ACT_ACR_4 333 404 - -
Aed9g1172 446 Gene3D - 112 189 - -
Aed9g1172 446 ProSiteProfiles ACT domain profile. 335 414 IPR002912 -
Aed9g1172 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR6 1 438 - -
Aed9g1172 446 SUPERFAMILY ACT-like 331 401 IPR045865 -
Aed9g1172 446 ProSiteProfiles ACT domain profile. 29 108 IPR002912 -
Aed9g1172 446 CDD ACT_ACR_2 117 190 - -
Aed9g1172 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 438 IPR040217 -
Aed9g1172 446 SUPERFAMILY ACT-like 112 187 IPR045865 -
Aed9g1172 446 SUPERFAMILY ACT-like 25 95 IPR045865 -
Aed9g1172 446 CDD ACT_ACR_3 255 329 - -
Aed9g1172 446 ProSiteProfiles ACT domain profile. 118 208 IPR002912 -
Aed9g1172 446 Pfam ACT domain 339 397 IPR002912 -
Aed9g1172 446 Pfam ACT domain 117 166 IPR002912 -
Aed9g1172 446 Pfam ACT domain 28 79 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1172 Aed-Chr9 8854473 8858253 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1172 - - gmx:100818506 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1172 9 8854473 8858253 Aed6g0492 6 4262103 4265404 ECH
Aed9g1172 9 8854473 8858253 Aed9g1172 9 8854473 8858253 ECH
Aed3g0160 3 1158042 1161939 Aed9g1172 9 8854473 8858253 ECH