Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1036 ATGGGTGCGAGTCGGAAGCTACAGGGTGAGATAGATCGCGTTCTCAAGAAGGTTCAGGAAGGAGTTGAAGTCTTTGATAGCATATGGAACAAGGTTTACGACACTGACAATGCTAACCAGAAGGAGAAATTTGAAGCGGACCTCAAGAAGGAGATTAAGAAGCTCCAGAGGTACAGAGACCAAATCAAGACCTGGATTCAGTCCAGTGAGATCAAGGACAAGAAGGTTAGTGCATCGTATGAGCAGGCTCTGGTGGATGCACGCAAGCTAATTGAGCGAGAAATGGAAAGATTTAAGATATGTGAGAAGGAAACTAAGACCAAAGCATTCTCCAAAGAAGGCTTGGGTCAACAGCCTAAGACTGATCCAAAAGAGAAGGCTAAATCAGAGACACGGGATTGGTTAAACAATGTGTGCTGGTTGACTGTTGAGACCTTTCCACTATTGGCAATATCTATGTTCATGCTTGTTCTTCAGATTTTCTTCTCTTATAATGCTGATTATACTAGTCTAGTGCTTGCCTTCCTGGTTGGAGAGCTAGAATCCCAAATTGATAGCTTTGAAGCGGAGCTTGAAGGGCTTTCTGTTAAGAAAGGAAAGAGCAGGCCACCCAGATTGACACATCTAGAGACATCAATTACTCGGCACAAGGCTCATATAAAAAAATGTGAATTCATTTTGAGGCTACTAGATAATGATGAATTTAGTCCTGAAGAAGTTAATGATGTCAAGGATTTCTTGGATGACTATGTTGAGCGTAATCAGGACGATTTCGATGAATTTGATGATGTTGATGACCTATACAGTTCATTGCCTTTAGATAAGGTGGAGACTCTAGAAGATCTTGTTACAATTCCTCCTGGTCTTTCTAAGGTGGCTGTTCCTACTCTTAACATGAAGAATACTTTGACAGTATCAGCATCTGCATCGCAAACATCTGAAACTATGATTTCTAATCATCAGGGTACTTCTGGCCAGGAGCAAGCTGATGACACAGCATCCCAGGATAGCAATTCTGACATTGTTGCCAAAACTCCACCTCCTAAAAGTGGTGGAATTAGTTCTGCTACTTCAACTCCTACTGGCAACCATGCTACTCCTGTTTCCGTGAATGTTTCTGGTCATAACTTGTCTAGTCCAGCTGCTGTTGCAGCCCTACCTGGTTCAAATTCTGTGAGGAATGTCTTAGAGAACACTAATGTTACCGATTCATCTTCTGTAAATCAGTCTACCTCTACAAAGGAAGAAGAAATTAATAACTTCCCTAGCCGGAGACTGTCTCCATCACTTTCTGATGCAACACTTTTGAGGGGCCGAAACAGCCTGTCAAATCAAGTAACAGCCAGCATTCCTCTTGGTTCTGGAAACATGGTGTCTAGCAATGGGGCCCTTGGATCTGTCTCTTCGGCATCTGAAATAGCTAAAAGGAATATATTGGGAGCTGATGATAGACTTGCAAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCACTAAGTAATAGATTGATCTTGCCTCAGGCTTCAAAGGCTAATGATGGAACTGTTTCAGTTGACTCTAGTACTGTTAATGAAGCAGCAGCTGGGAGAGTTTTCTCCCCTTCTGTGGTTCCTGGCATGCAATGGAGACCTGGAAGTGGAAGCCCCTTTCAGAGTCAGAATGATGCAGGCCAGCTTCGTGGAAGAACTGAAATTGCTCCTGATCAAAGGGAAAAGTTTTTGCAGAAGTATCAGCAAGTGCAACAAGGGCATAGTACCCTTCTTAATATGCCTTCTCTCGTTGGGGGAAACCACAAGCAGTTTTCGACCCAGCAGCAAAATCCCCTTTTGCAACAGTTTAACTCTCATGGCTCATCTGTTTCTTCTCAATCTGGTATTGGACTTGGGGTCCAATCCACAAGTCTCGGTGGTATTTCTTCTGCTTCACTACAGCAGCCATCCAATTCTGTCCATTCCCCATCTAGTCAACAGCCATTGATGGCAGGTTTTTCTAAAGATGCAGATGTTGGCAATTCTAAGATTGAAGAACAGCAGCACCATCATAATTTCCCTGATGATTCAACAACAGAATCTAGTGCTAGTACTGGGATTGGCAAGATGATTCAAAATGAAGATGATTCAAAATCAGCATATGCTGTAGATTCTCCTGCAGGAGTGTCTGCCTCTCTTCCAGAATCTGCTCAAATGCCCAGGGATATTGATTTGTCTCCTGGCCAACCATTACAATCCAATCAACCTACTGGCAACCTTGGTGTCATTGGAAGAAGAAATGGTGCTGAACATGGAGCCATTGGTGATAATTTTAGTGGATCGAGTGTTAGTTCTGGTGGAGTGCGTGATCACTTATATAATTTGCAAATGCTTGAGGCAGCCCACTTCAAAATTCCTCTACCCAGAGACTCAGAACGTCCCCGGGCTTATACTCCTAAGCATCCAGCAATTACACCTTCTAGTTATCCTCAAGTACAGGCACCTATTGTTAATAATCCTGCTTTTTGGGAGAGAGTAGGTCTTGAACCATTTGGCACTGATACTCTGTTCTTTGCCTTTTATTATCAACAGAATACTTACCAACAATATTTGGCTGCTAAGGAGTTAAAGAAGCAGTCTTGGAGATACCACCGAAAGTATAACACTTGGTTTCAGCGGCATGAAGAGCCCAAAGTTGCAACTGATGAATATGAGCAGGGAACTTATGTGTACTTTGATTTCCATATAGCAAATGATGACATGCAACATGGATGGTGTCAAAGAATCAAGACTGAATTCACTTTTGAGTATAATCATCTTGAAGATGATCTTCTTGTATAG 2808 0.4266 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVCWLTVETFPLLAISMFMLVLQIFFSYNADYTSLVLAFLVGELESQIDSFEAELEGLSVKKGKSRPPRLTHLETSITRHKAHIKKCEFILRLLDNDEFSPEEVNDVKDFLDDYVERNQDDFDEFDDVDDLYSSLPLDKVETLEDLVTIPPGLSKVAVPTLNMKNTLTVSASASQTSETMISNHQGTSGQEQADDTASQDSNSDIVAKTPPPKSGGISSATSTPTGNHATPVSVNVSGHNLSSPAAVAALPGSNSVRNVLENTNVTDSSSVNQSTSTKEEEINNFPSRRLSPSLSDATLLRGRNSLSNQVTASIPLGSGNMVSSNGALGSVSSASEIAKRNILGADDRLASSGMVQPLVSPLSNRLILPQASKANDGTVSVDSSTVNEAAAGRVFSPSVVPGMQWRPGSGSPFQSQNDAGQLRGRTEIAPDQREKFLQKYQQVQQGHSTLLNMPSLVGGNHKQFSTQQQNPLLQQFNSHGSSVSSQSGIGLGVQSTSLGGISSASLQQPSNSVHSPSSQQPLMAGFSKDADVGNSKIEEQQHHHNFPDDSTTESSASTGIGKMIQNEDDSKSAYAVDSPAGVSASLPESAQMPRDIDLSPGQPLQSNQPTGNLGVIGRRNGAEHGAIGDNFSGSSVSSGGVRDHLYNLQMLEAAHFKIPLPRDSERPRAYTPKHPAITPSSYPQVQAPIVNNPAFWERVGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDMQHGWCQRIKTEFTFEYNHLEDDLLV 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1036 935 MobiDBLite consensus disorder prediction 636 660 - -
Aed9g1036 935 Coils Coil 41 61 - -
Aed9g1036 935 Pfam NOT2 / NOT3 / NOT5 family 791 929 IPR007282 GO:0006355
Aed9g1036 935 PANTHER BNAA10G16600D PROTEIN 174 935 - -
Aed9g1036 935 Gene3D - 776 930 IPR038635 -
Aed9g1036 935 MobiDBLite consensus disorder prediction 307 373 - -
Aed9g1036 935 MobiDBLite consensus disorder prediction 636 664 - -
Aed9g1036 935 PIRSF NOT_su_3_5 169 935 IPR012270 GO:0006355|GO:0030015
Aed9g1036 935 PIRSF NOT_su_3_5 1 140 IPR012270 GO:0006355|GO:0030015
Aed9g1036 935 PANTHER BNAA10G16600D PROTEIN 1 139 - -
Aed9g1036 935 Pfam Not1 N-terminal domain, CCR4-Not complex component 177 274 IPR007207 GO:0005634|GO:0006355
Aed9g1036 935 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 138 IPR007207 GO:0005634|GO:0006355
Aed9g1036 935 PANTHER CCR4 NOT-RELATED 174 935 IPR040168 GO:0030015
Aed9g1036 935 MobiDBLite consensus disorder prediction 398 430 - -
Aed9g1036 935 PANTHER CCR4 NOT-RELATED 1 139 IPR040168 GO:0030015
Aed9g1036 935 Coils Coil 177 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1036 Aed-Chr9 7487880 7499887 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1036 K12580 - gmx:100785965 1551.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1036 9 7487880 7499887 Aed7g0861 7 6510712 6524337 PCT