Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0861 ATGGGAGCGAGTCGAAAACTTCAGGGCGAGATTGACCGTGTTCTCAAAAAGGTTCAGGAAGGCGTCGAAGTCTTCGATAGCATCTGGAACAAGGTTTACGACACCGATAATGCGAACCAGAAGGAGAAGTTCGAGGCTGACCTGAAGAAGGAGATTAAGAAGCTGCAGAGGTATAGGGACCAGATTAAGACATGGATTCAGTCCAGTGAGATCAAAGACAAGAAGGTTAGTGCCTCGTATGAGCAGGCTCTGGTGGATGCGCGCAAGCTTATTGAGCGTGAAATGGAAAGATTCAAGATCTGTGAGAAGGAGACAAAAACAAAAGCATTCTCCAAAGAAGGCTTAGGTCAACAGCCTAAAACTGTTGGGGAGTTAGAAAGTCAGATCGATAACTTTGAAGCTGAGCTTGAAGGACTTTCTGTCAAGAAAGGAAAGAGCAGGCCACCCAGATTGACACATCTAGAAACATCAATTACTCGGCACAAGGCTCATATAAAAAAATGTGAATTTATCTTGAGGCTACTAGATAATGATGAACTAAGTCCCGAGGAGGTTAATGATGTCAAAGATTTCCTGGATGACTATGTGGAGCGTAATCAGGAGGACTTTGAAGACTTTAGTGATGTTGATGAGCTATATATTTCATTACCCTTGGACAAGGTGGAGTCACTTGAAGATATTGTTACAATTCCCCCTGGTCTTGCTAAGGTGGCACCTGTGCTTAGCTTGAAGCCTTCTGTGGCAACATCAGCTTCAGCATCACAAACATCTGAGCAAGCTGATGATACAGCTTCCCAGGATAGCAATTCTGATATTGGGGCAAGAACTTCACCTCCTAAAAGTAGTATAGTTAGTCCTACTACTACAACACCAGCAGGGAATTTTGCTACTCCTGTTTCTTTGAATGTTCCTGTGCCTAACTTGTCGAGTCCACCAGCCATTGCATCAGTCCTGCCTGGTTCAAATTCTGTTCGGAGTTCCTTGGAGATTAGTAGTGCTGTCAATGCTTCATCTTTTGTAAATCAGTCTAGCACTATGAAGGAGGAAGAGATTAATAGTTTCTCTGGACGAAGACCATCTCCATCGCTTTCTGATGTTGCACTTGTAAGGAACATCAGCAGAAACAGCCTATCAAATCAAGCAACAAATAACATACCTCTTGTTTCTGGCAACATGGTTTCCAGCAATGGGCCCCTCGGTTCAGTCCCTTCAGCATCTGAAATAACCAAGAGAAACATATTGGTAGCTGATGATAGACTCGGAAGCAATGGGATGGTGCAGCCACTTGTATCCCCTTTAAGTAATAGAATGATCATGCCTCAGGTTTCAAGGGCTAATGATGGAACTTCCTCAGTTGACTCTAGTAGTGTCAACGAAAATGCAACTGTATCTGGGAGAGTTTTCTCCCCTTCTGCTGTTCCTGGCATGCAATGGAGACCTGGAGGCCCAGGCCCCTTCCAGAATCAGAATGACGTGGGTCAGATTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGGGAAAGATATTTGCAGAAGTTGCAGCAAGTGCAGCAGCAAGTGCAGCAACAAGGGCAAAATGCCCTTCTTAATATGCCATCTTTTGCAGGAGGGAATCCTAAGCAGTTTTCTGCTCAGCAACAAAATCCTCTCTTACAGCAGTTCAATTCTCAAGGCTCATCTGTTGCTTCTCAATCTGGTGTGGGACTTGGAGTCCAGCCACCAGGTCTTAGTGGTATTGGTTCCACCTCATTACCGCAGCCACCCAATTCTGTCCATTCTCCATCTAGCCAGCAACCATTGCTGTCAGTTGTTTCCAAAGATGCAGATATTGGCAATTCTAAGGTTGACGAGCCACAACAACAGATTTTTCCTGATGATTCGGGGACTGAATCTACTCCTAGTACTGGGATTGGCAAGAATTTCATGAATGACGATGAATTGAAATCCACATTTTCTGTAGATTCTCCTACACAGACAGGAGTTCCTGCCTCTCCTCCAGAGCCTGCTCAGATTTCTAGAGATATTGATTTGTCTCCTGGCCAACCTTTACAATCAAATCAGCGTACTGGTAACCTTGGTGTTATAGGAAGAAGTTCTACTGACCTTGGAGCTGTTGGCGACAACTTTAGTGCATCAACTGTGAATTCTGGCGGAGTTCATGATCAATTATATAATTTGCAGATGCTTGAGGCAGCTCACCTCAAACTTCCACAACCTAAGGACTCAGAACGTCCTAGGACCTATACTCCTAAACACCCTGTGATAACACCTCCTAGTTTTCCTCAAGTACAGGCACCTATTGTTAATAACCCTGCTTTTTGGGAGAGAGTAGGTGCCGAACCACATGGCACCGATACCCTGTTCTTTGCATTTTACTATCAACAGAACACTTACCAACAGTATATGGCTGCAAAAGAGCTAAAGAAGCAGTCTTGGAGATATCACCGGAAGTATAACACATGGTTTCAACGGCATGAAGAGCCAAAAGTCGCAACAGATGAATATGAGCAGGGAACATATGTGTACTTCGATTTCCATATTGCAAATGATGATCTGCAACATGGGTGGTGTCAAAGAATCAAGACTGACTTCACTTTTGAATATAATTATCTTGAAGATGAGCCTATTGTCTAG 2634 0.4393 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTVGELESQIDNFEAELEGLSVKKGKSRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEEVNDVKDFLDDYVERNQEDFEDFSDVDELYISLPLDKVESLEDIVTIPPGLAKVAPVLSLKPSVATSASASQTSEQADDTASQDSNSDIGARTSPPKSSIVSPTTTTPAGNFATPVSLNVPVPNLSSPPAIASVLPGSNSVRSSLEISSAVNASSFVNQSSTMKEEEINSFSGRRPSPSLSDVALVRNISRNSLSNQATNNIPLVSGNMVSSNGPLGSVPSASEITKRNILVADDRLGSNGMVQPLVSPLSNRMIMPQVSRANDGTSSVDSSSVNENATVSGRVFSPSAVPGMQWRPGGPGPFQNQNDVGQIRGRTEIAPDQRERYLQKLQQVQQQVQQQGQNALLNMPSFAGGNPKQFSAQQQNPLLQQFNSQGSSVASQSGVGLGVQPPGLSGIGSTSLPQPPNSVHSPSSQQPLLSVVSKDADIGNSKVDEPQQQIFPDDSGTESTPSTGIGKNFMNDDELKSTFSVDSPTQTGVPASPPEPAQISRDIDLSPGQPLQSNQRTGNLGVIGRSSTDLGAVGDNFSASTVNSGGVHDQLYNLQMLEAAHLKLPQPKDSERPRTYTPKHPVITPPSFPQVQAPIVNNPAFWERVGAEPHGTDTLFFAFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTDFTFEYNYLEDEPIV 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0861 877 PIRSF NOT_su_3_5 1 877 IPR012270 GO:0006355|GO:0030015
Aed7g0861 877 Coils Coil 41 61 - -
Aed7g0861 877 Coils Coil 122 142 - -
Aed7g0861 877 MobiDBLite consensus disorder prediction 738 761 - -
Aed7g0861 877 MobiDBLite consensus disorder prediction 444 467 - -
Aed7g0861 877 MobiDBLite consensus disorder prediction 614 695 - -
Aed7g0861 877 PANTHER CCR4 NOT-RELATED 1 875 IPR040168 GO:0030015
Aed7g0861 877 MobiDBLite consensus disorder prediction 444 492 - -
Aed7g0861 877 MobiDBLite consensus disorder prediction 576 599 - -
Aed7g0861 877 PANTHER BNAA10G16600D PROTEIN 1 875 - -
Aed7g0861 877 Pfam NOT2 / NOT3 / NOT5 family 734 871 IPR007282 GO:0006355
Aed7g0861 877 Coils Coil 506 526 - -
Aed7g0861 877 MobiDBLite consensus disorder prediction 555 599 - -
Aed7g0861 877 MobiDBLite consensus disorder prediction 614 660 - -
Aed7g0861 877 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 218 IPR007207 GO:0005634|GO:0006355
Aed7g0861 877 MobiDBLite consensus disorder prediction 251 291 - -
Aed7g0861 877 MobiDBLite consensus disorder prediction 677 695 - -
Aed7g0861 877 Gene3D - 717 872 IPR038635 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0861 Aed-Chr7 6510712 6524337 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0861 K12580 - gmx:100780204 1569.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1036 9 7487880 7499887 Aed7g0861 7 6510712 6524337 PCT