Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1035 ATGGAGAAAAACTGGGTTTTGAGATGGGTTTTGGCGGTGGGGTTGATGTGTTTGTGTGTGGAAGGGATTGGTGTGAATTGGGGAACTCAAGCAACCCACAAGTTGCCACCAGACACAGTGGTTCAGATGTTGAAGGATAATGGGATTCAGAAAGTGAAGCTTTTTGATTCAGATGACACAACAATGACTGCTTTGGCTGGGTCTGGGATTGAAGTCATGGTGGCTATCCCCAATAACCAGCTTGCTGATATGAATGACTATGGAAGGGCCAAACAATGGGTCAAGAAAAACGTCACACGTTACAACTTCAATGGAGGCGTTAATGTCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTGAAATCCTACAACAATTCATTCTTGAACATCACCTTCCCTGCACTACAGAACATTCAAAACGCCCTCAACGAAGCAGGCCTTGGAGACAAAGTAAAGGCCACAGTGCCCTTAAATGCAGATGTGTATCAGTCTCCAGAGAGTAACCCTGTTCCATCTGCAGGAGTATTTAGGCCTGATATCAGTGGTCTCATGACACAGATAGTCCAATTCCTTAGCAAGAACAACGCGCCATTCACCGTGAACATCTACCCATTCTTAAGTCTCTACGGTAATGATGATTTCCCATTCAACTATGCCTTCTTCGACGGAGTAGACAATCCAGTGAATGACAACGGCACTCCATACACAAACGTGTTCGACGCCAACTTCGATACCTTGGTTGCTGCTCTCAAGTCAGTTGGGTTTGGTGACCTGCCTGTTTTGGTTGGAGAAGTGGGGTGGCCTACAGAAGGGGACAAGAATGCCAATGCAGGCAATGCTTTGAGATTCTACAACGGCCTCTTGCCGAGGCTTGCAGCCGACAGAGGCACCCCACGCCGCCCTGGACACATTGAGGTCTATCTATTCGGCCTCATCGATGAGGACGCCAAGAGCATTGCCCCGGGAAGCTTCGAGCGCCACTGGGGGATATTCCGATATGATGGACAGCCTAAGTTTGCAATGGACCTCTCTGGTCAGAACCAAAACAAGCTCCCCATAGGTGCACAGAATGTGAAGTATCTTGATCCAAGATGGTGCATGTTTAACCCTGATGCCAAGGATCTCAGCAAACTTGCAGAGAACATTGACTATGCTTGCACCTTTGGAGATTGCACTGCACTTGGATATGGCTCTTCTTGCAACAATTTGGATGCTAATGGGAATGCTTCTTATGCGTTTAATATGTACTTCCAGGTGCAAAATCAGAACCCTATGGCATGCAATTTTCAAGGCTTGGCTAAGCTTACTACGAATAATATCTCAACACCAACTTGCAATTTCATCGTTCAGATAGTGAATTCTTCAGCCTCTTCTTTGATGCCCTCACTTATTGCTCTCTTCTTTATTGGCTTATTCATGATTCTGTCTTCTTAG 1434 0.4609 MEKNWVLRWVLAVGLMCLCVEGIGVNWGTQATHKLPPDTVVQMLKDNGIQKVKLFDSDDTTMTALAGSGIEVMVAIPNNQLADMNDYGRAKQWVKKNVTRYNFNGGVNVKYVAVGNEPFLKSYNNSFLNITFPALQNIQNALNEAGLGDKVKATVPLNADVYQSPESNPVPSAGVFRPDISGLMTQIVQFLSKNNAPFTVNIYPFLSLYGNDDFPFNYAFFDGVDNPVNDNGTPYTNVFDANFDTLVAALKSVGFGDLPVLVGEVGWPTEGDKNANAGNALRFYNGLLPRLAADRGTPRRPGHIEVYLFGLIDEDAKSIAPGSFERHWGIFRYDGQPKFAMDLSGQNQNKLPIGAQNVKYLDPRWCMFNPDAKDLSKLAENIDYACTFGDCTALGYGSSCNNLDANGNASYAFNMYFQVQNQNPMACNFQGLAKLTTNNISTPTCNFIVQIVNSSASSLMPSLIALFFIGLFMILSS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1035 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 466 IPR044965 GO:0004553|GO:0005975
Aed9g1035 477 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Aed9g1035 477 SMART X8_cls 364 447 IPR012946 -
Aed9g1035 477 Pfam X8 domain 365 433 IPR012946 -
Aed9g1035 477 Gene3D Glycosidases 21 351 - -
Aed9g1035 477 Gene3D - 361 459 - -
Aed9g1035 477 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Aed9g1035 477 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 466 - -
Aed9g1035 477 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1035 Aed-Chr9 7471785 7475273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1035 6 476 Miscellaneous Gene Families AT1G64760 74.310 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1035 - - gmx:100815300 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1035 9 7471785 7475273 Aed7g0860 7 6506079 6508741 PCT