Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0860 ATGGGTTGGTGTGTGGAAGGGCTTGGGGTGAATTGGGGGACTCAAGCTACACACCAGTTGAAAGCAGACACAGTGGTTGAGATGTTGAAGGACAACGGGATTCAGAAAGTGAAGCTGTTTGATGCAGATGAGTCTTGCATGAGTGCTCTATCTGGGTCTGGGATTGAAGTCATGCTTGCCATTCCCAATATCCAACTTGCTGAGATGAATGACTATGATCGTGCCTTGCAGTGGGTCAAGAAGAATGTCACTCGTTACAACTTCAGGGGTGGAGTTAACATCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTAAAATCCTACAATGGTTCATTCTTGAATATCACCCTCCCTGCATTACAGAACATTCAAAATGCCCTCAATGATGCAGGCCTAGGGGACTCCATAAAGGCCACAGTGCCCTTAAATGCTGATGTGTACGAGTCTCCACCAAACAACCCTGTGCCCTCAGCAGGAATATTTAGGCCTGATATAACTGTTCTAATGACCCAAATAGTGCAATTTTTGGCAAAGAACAATGCACCATTCACAGTGAACATTTATCCCTTCTTGAGCCTCTATGGGAATGACAACTTCCCCTTTGACTATGCTTTCTTTGATGGGGTGGCCAATCCCATAAATGACAATGGGGTTTCATATACCAATGTCTTTGATGCAAATTTTGACACTTTAGTCTCTGCCCTAAAAAATGTGGGGTTTGGGAACATGCCAATTTTGGTAGGAGAGGTAGGTTGGCCCACAAATGGTGACAAGAATGCTAATGTAGCCAATGCTTTAAGGTTCTATAATGGCCTTCTACCAAGGCTTGCAATGAATAAAGGGACCCCACTTAGGCCAGGATTCATTGAAGTTTATCTTTTTGGGCTAATTGATGAGGATGCAAAGAGCATTGCCCCAGGGAACTTTGAACGCCATTGGGGCATTTTTGGATATGATGGGAAGCCCAAGTTTGCAATGGACCTTTCTGGAAAAGGCCAAAACAAGTTATTAGTTGGTGCTCAAAATGTGCACTATCTTGACTCAAGTTGGTGCATGTTTAACCCTGATGCACAGAACCTAAGCAAACTTGCAGATAACATTAACTATGCTTGCACCTTTGCTGATTGCACTGCACTTGGATATGGATCTTCTTGCAACAACTTGGATGCCAATGGGAATGCTTCTTATGCTTTCAATATGTACTACCAGACACAGGATCAGAACTACATGGCCTGCAATTTTGAAGGGTTGGCTAGGCTTACAACAAGCAACATTTCAACACCTACTTGCAATTTCATTGTTCAGATAAATCCTTCCTTGTCCTCTTCTTTGCGGCCCCCAATTGTAGCCTTCTTATTTGTCACTGTACTATCATTGATTCTATTTTTGTAG 1392 0.431 MGWCVEGLGVNWGTQATHQLKADTVVEMLKDNGIQKVKLFDADESCMSALSGSGIEVMLAIPNIQLAEMNDYDRALQWVKKNVTRYNFRGGVNIKYVAVGNEPFLKSYNGSFLNITLPALQNIQNALNDAGLGDSIKATVPLNADVYESPPNNPVPSAGIFRPDITVLMTQIVQFLAKNNAPFTVNIYPFLSLYGNDNFPFDYAFFDGVANPINDNGVSYTNVFDANFDTLVSALKNVGFGNMPILVGEVGWPTNGDKNANVANALRFYNGLLPRLAMNKGTPLRPGFIEVYLFGLIDEDAKSIAPGNFERHWGIFGYDGKPKFAMDLSGKGQNKLLVGAQNVHYLDSSWCMFNPDAQNLSKLADNINYACTFADCTALGYGSSCNNLDANGNASYAFNMYYQTQDQNYMACNFEGLARLTTSNISTPTCNFIVQINPSLSSSLRPPIVAFLFVTVLSLILFL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0860 463 ProSitePatterns Glycosyl hydrolases family 17 signature. 243 256 IPR000490 GO:0004553|GO:0005975
Aed7g0860 463 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 5 445 IPR044965 GO:0004553|GO:0005975
Aed7g0860 463 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 5 445 - -
Aed7g0860 463 SUPERFAMILY (Trans)glycosidases 8 327 IPR017853 -
Aed7g0860 463 SMART X8_cls 349 432 IPR012946 -
Aed7g0860 463 Pfam Glycosyl hydrolases family 17 8 327 IPR000490 GO:0004553|GO:0005975
Aed7g0860 463 Gene3D Glycosidases 7 335 - -
Aed7g0860 463 Pfam X8 domain 350 418 IPR012946 -
Aed7g0860 463 Gene3D - 344 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0860 Aed-Chr7 6506079 6508741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0860 1 436 Miscellaneous Gene Families AT1G64760 74.541 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0860 - - gmx:102666963 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1035 9 7471785 7475273 Aed7g0860 7 6506079 6508741 PCT