Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0683 ATGGCCAAAACCTCCTTCAAGCTACAACATCCTTTGGAAAGAAGGCAAGCTGAAGCTTCTCGCATTAGGGAGAAATATCCTGATAGAATACCTGTGATTGTGGAGAAAGCTGAAAGAAGTGACATTCCAGACATTGATAAGAAAAAATACCTCGTCCCTGCTGATTTGACTGTTGGCCAGTTTGTTTATGTTGTCCGCAAAAGGATTAAGCTCAGTGCAGAGAAGGCTATTTTCGTTTTCATCAATAACACTCTTCCTCCAACTGCTGCATTGATGTCTGCTATTTATGAGGAAAATAAGGATCAAGATGGCTTTCTTTACATGACTTACAGTGGAGAGAACACCTTCGGATCCCACTAG 360 0.4139 MAKTSFKLQHPLERRQAEASRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFINNTLPPTAALMSAIYEENKDQDGFLYMTYSGENTFGSH 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0683 119 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Aed9g0683 119 MobiDBLite consensus disorder prediction 1 20 - -
Aed9g0683 119 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Aed9g0683 119 Gene3D - 1 117 - -
Aed9g0683 119 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Aed9g0683 119 CDD Ubl_ATG8 12 114 - -
Aed9g0683 119 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0683 Aed-Chr9 4804213 4808096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0683 K08341 - gmx:100527884 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0683 9 4804213 4808096 Aed9g0683 9 4804213 4808096 ECH
Aed5g0738 5 5492437 5494722 Aed9g0683 9 4804213 4808096 ECH