Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0738 ATGGCTAAGAGCTCATTCAAGATGGAACACCCACTTGGTCCACCATGTGATTTTTCTAATCTGTGCAAACATTTCATGGCAGAGAGGAGGCAGGCTGAAGCATCTCGGATAAGAGAGAAGTATCCTGACCGAATTCCAGTAATTGTTGAAAGGGCAGAGAAGAGTGATGTTCCTGAAATTGATAAGAAAAAGTATCTTGTTCCTGCTGATTTAACTGTTGGTCAGTTTGTGTATGTGGTGCGGAAGAGAATCAAGCTGAGTCCCGAGAAGGCCATCTTCATTTTTGTTAAGAACATTTTACCACCAACTGCGGCAATGATGTCTGCAATTTATGAGGAGAACAAGGATGAAGATGGATTCCTATATATGACATACAGTGGAGAGAACACGTTTGGGCTTTTGTTCTGA 408 0.4191 MAKSSFKMEHPLGPPCDFSNLCKHFMAERRQAEASRIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGLLF 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0738 135 PANTHER AUTOPHAGY-RELATED PROTEIN 1 132 - -
Aed5g0738 135 SUPERFAMILY Ubiquitin-like 25 132 IPR029071 -
Aed5g0738 135 Pfam Autophagy protein Atg8 ubiquitin like 29 132 IPR004241 -
Aed5g0738 135 CDD Ubl_ATG8 28 129 - -
Aed5g0738 135 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 132 IPR004241 -
Aed5g0738 135 Gene3D - 2 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0738 Aed-Chr5 5492437 5494722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0738 K08341 - gmx:100301895 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0738 5 5492437 5494722 Aed5g0738 5 5492437 5494722 ECH
Aed5g0738 5 5492437 5494722 Aed9g0683 9 4804213 4808096 ECH