Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0077 ATGGCCTCTGCTACTCTTCTCAAGTCATCATCTCCTGTTCTTGACAAGTGCGAGTGGGTCAAAGGCCAAACCCTTCGCCAGCCTGTCGTGAGATGCAACCCCGCCTCAGCTTCAGCCTCACCTCTCTCCATCAGAGCTGGTTCCTATGCTGACGAGCTCGTCAAAACAGCCGGTTTGGTGCCCCTAGCTGGTTCGAACGATGAGTTATGGTGCCAAGGTCTTGATGGTCTTGCATCTCGCTCAGCTGCATACTACCAGCAAGGTGCCCGTTTCGCCAAGTGGCGTACTGTTGTGAGCATTCCGAACGGTCCCTCTAGTCTGGCAGTGAAGGAAGCTGCCTGGGGTCTAGCTCGGTATGCTGCGATTTCACAGGACAACGGTTTAGTCCCAATTGTTGAGCCAGAGATCTTGCTTGATGGTGAGCATGGCATTGACAGAACATTCCAAGTAGCACAAAAGGTGTGGGCAGAGGTATTCTTCTACCTTGCCGAGAACAATGTCCTTTTCGAGGGTATTCTCCTCAAGCCTAGCATGGTTACTCCTGGAGCCGAGTCTAAGGACAAGGCCACTCCACGCCAAGTTTCTGATTACACCCTCAAGCTCCTTCACAGGAGAATCCCACCTGCTGTCCCTGGAATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCTTGAACTTGAATGCAATGAACCAGTCTCCAAACCCATGGCACGTGTCCTTCTCCTACGCCAGAGCCCTCCAAAACACTTGCTTGAAGACATGGGGAGGGCGCCCAGAGAACGTTAAGGCTGCACAAGATGCGCTCCTTTTCCGTGCTAAGTCCAACTCACTCGCTCAGCTTGGAAACTACACTGGCGACGGTGAATCCGAGGAAGCCACAAAGGGAATGTTCGTCAAAGGCTACTCCTACTAG 921 0.5233 MASATLLKSSSPVLDKCEWVKGQTLRQPVVRCNPASASASPLSIRAGSYADELVKTAGLVPLAGSNDELWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSSLAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFQVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDKATPRQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLFRAKSNSLAQLGNYTGDGESEEATKGMFVKGYSY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0077 306 Gene3D Aldolase class I 53 306 IPR013785 -
Aed9g0077 306 Pfam Fructose-bisphosphate aldolase class-I 57 306 IPR000741 GO:0004332|GO:0006096
Aed9g0077 306 SUPERFAMILY Aldolase 57 306 - -
Aed9g0077 306 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 57 306 - -
Aed9g0077 306 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 167 177 IPR029768 -
Aed9g0077 306 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 57 306 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0077 Aed-Chr9 539872 541881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0077 58 306 Miscellaneous Gene Families AT3G52930 54.545 7.65e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0077 K01623 - gmx:100798677 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0077 9 539872 541881 Aed9g0077 9 539872 541881 ECH
Aed5g0346 5 2439071 2440476 Aed9g0077 9 539872 541881 ECH