Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0346 ATGTATGGCCGTGTATGTACTAATACATGGTTTATGTGCCGAGAACAACAGGGTTTGGTGCCCCTTGCTGGTTCCAACGACGAGTCATGGTGCCAAGGTTTGGATGGTCTTGCTTCTCGCTCAGCTGCATACTACCAACAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTGGCAGTTAAGGAAGCAGCCTGGGGTCTGGCTCGCTATGCTGCAATTTCTCAGGACAATGGATTGGTTCCAATTGTGGAGCCAGAGATCTTGCTTGATGGGAACCATGGTATTGATAGAACTTTTGAAGTAGCACAAAAGGTCTGGGCAGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTTTTTGAGGGTATTCTCCTTAAGCCTAGCATGGTTACACCTGGAGCCGAGTCCAAGGACAGGGCCAGTCCTCAGACAGTTTCTGATTACACCCTCAAGCTCCTTCACAGGAGAATCCCACCTGCTGTCCCTGGAATTATGTTTTTGTCTGGTGGACAGTCTGAGCTTGAAGCTACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCCTTCTCATATGCCAGAGCCCTCCAAAACACTACCTTGAAGACATGGGGAGGCCGCGCGGAGAATGTGAAGGCGGCACAAGATGCACTCCTCTTCCGTGCCAAGTCCAACTCGCTTGCTCAGCTTGGAAAGTACACCGGTGAGGGTGAATCCGAGGAAGCCAAGAAGGAGTTGTTCGTCAAAGGCTACTCCTACTAA 801 0.5056 MYGRVCTNTWFMCREQQGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGNHGIDRTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDRASPQTVSDYTLKLLHRRIPPAVPGIMFLSGGQSELEATLNLNAMNQSPNPWHVSFSYARALQNTTLKTWGGRAENVKAAQDALLFRAKSNSLAQLGKYTGEGESEEAKKELFVKGYSY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0346 266 Gene3D Aldolase class I 9 266 IPR013785 -
Aed5g0346 266 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 16 266 IPR000741 GO:0004332|GO:0006096
Aed5g0346 266 SUPERFAMILY Aldolase 17 266 - -
Aed5g0346 266 Pfam Fructose-bisphosphate aldolase class-I 16 266 IPR000741 GO:0004332|GO:0006096
Aed5g0346 266 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 127 137 IPR029768 -
Aed5g0346 266 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 16 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0346 Aed-Chr5 2439071 2440476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0346 16 266 Miscellaneous Gene Families AT3G52930 54.510 1.24e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0346 K01623 - gmx:100818915 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0346 5 2439071 2440476 Aed5g0346 5 2439071 2440476 ECH
Aed5g0346 5 2439071 2440476 Aed9g0077 9 539872 541881 ECH