Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1688 ATGGGGTCTCTTGTTGCTGAAACAGCCATGAAGAAACCAATGTGGTTGTATCCAAAGGTTTTGGGTTTTAATCCTTCTGAAAGATGGGGGCACTCTGCTTGCTTCTCTGGGGGGCTTATGTATGTCTTTGGGGGTTGTTGTGGGGGACTACACTTTGGAGACGTTCTGTGTTTGGACCTTGACAAAATGGAATGGAGCAAGCTTGGCACCACAGGTGAAAAGCCAGGCCCTAGAGATAGCCACAGTGCTGTTCTTGTAGGGCACAGAATGGTAGTGTTTGGTGGCACAAACGGGTTGAAGAAGGTGAATGAGACTCATATATTGGACCTTGTTACCAAAGAGTGGATTAGTCCCAAATGTGAAGGAACACCACCTTCTCCAAGGGAGAGTCACACTGCAACCCTAGTTGGTGATGAAAGACTAGTGATTTTTGGTGGCAGTGGAGAAGGTGGTGCAAACTATTTAAATGATTTGCATGTTCTAGACCTTAGAACCATGAGGTGGAGTTCTCCTGAGGTCAAAGGTGATTTTCCTGTGCCTAGGGATAGTCACAGCACTCTTGCAATTGGGAACAAGCTTGTTGTCTATGGAGTCAGGGCAGGTCATGCAGCTGTGAGTATTGGAACCAAGAAAGAGTCCCCAGTGCAAGTTCTTGTGAGGTGTGGGGAAGATGAACGTCCTTTGAACGAATTGTTAGTGTTGCAGCTTGGAGCAGAGCATCCTAATGGGCGTTACAACATTTCCATGTGCAAAGTTTTTGGAACTTGTTGGAATCATCAAAAGAGGATCATAACTGGAGGAGCAGAAATCAACTCGATATCTCCACGCAATGGGAATAATAATATGGAAGTCTTGGGCACTTCACAACAGAAGAGGAGGAGAATTGCAGTTGCAAAGGTGTGGGATGTTGAATCAGAACAAGAAGAACATTCCCTTTCACTGTCCCAGCATTCATCTCCATCTCAATCTGATCAAGAACAGACCCCTGCAGGTCAAAAAGCAAATGTTTCTGTCATGGATTCTCAGCAGAGGCATCACTGGTTCAAACAGATCAACAAAAGTCCAAGCTATTGCCACCTTGACAATGTCTCAATTAGTAATAGTAACACAGTTTTGAAGAATATCACACAAAGAAGTCTTCATCATCTCATGGAACATCAACCTAAACAAGAGCAGAATGTTGTTCATGTTGACGAGGATCGAAAAATAGCCCGACACACTCAACACCTGATCGGTGCTGAAGTTCGGGGAAAAGTTGATGGAGCCTTTGATTCAGGTTTACTCATGACCGCAGCTGTGAATGGAAGAGTTTTCAGAGGAGTCTTATTTGCACCAGGAGGAGGAGTATTCTCCACACGTGTTGAGCCAAAGTGTTCACTACCATGTTCATTTCCCTCCACTCAGCCATTTATGAACTCAAATCATGTGAGGGATTCGCAGCAAGTAAGGCATCCTGTGGTAGCTCAGCCAACACCAATCAAAGAGCACAAAGTGAGGAGTGACCTTCAAGGGTTGGTTTTGACACTTGGAGGGCCTGCAAGTGGAAACCATGCTTAA 1557 0.4509 MGSLVAETAMKKPMWLYPKVLGFNPSERWGHSACFSGGLMYVFGGCCGGLHFGDVLCLDLDKMEWSKLGTTGEKPGPRDSHSAVLVGHRMVVFGGTNGLKKVNETHILDLVTKEWISPKCEGTPPSPRESHTATLVGDERLVIFGGSGEGGANYLNDLHVLDLRTMRWSSPEVKGDFPVPRDSHSTLAIGNKLVVYGVRAGHAAVSIGTKKESPVQVLVRCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTCWNHQKRIITGGAEINSISPRNGNNNMEVLGTSQQKRRRIAVAKVWDVESEQEEHSLSLSQHSSPSQSDQEQTPAGQKANVSVMDSQQRHHWFKQINKSPSYCHLDNVSISNSNTVLKNITQRSLHHLMEHQPKQEQNVVHVDEDRKIARHTQHLIGAEVRGKVDGAFDSGLLMTAAVNGRVFRGVLFAPGGGVFSTRVEPKCSLPCSFPSTQPFMNSNHVRDSQQVRHPVVAQPTPIKEHKVRSDLQGLVLTLGGPASGNHA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1688 518 SUPERFAMILY Kelch motif 19 209 IPR015915 GO:0005515
Aed8g1688 518 MobiDBLite consensus disorder prediction 312 337 - -
Aed8g1688 518 MobiDBLite consensus disorder prediction 308 337 - -
Aed8g1688 518 Gene3D - 11 303 IPR015915 GO:0005515
Aed8g1688 518 PANTHER KELCH REPEAT DOMAIN 1 197 - -
Aed8g1688 518 PANTHER KELCH REPEAT DOMAIN 215 516 - -
Aed8g1688 518 Pfam Galactose oxidase, central domain 87 135 - -
Aed8g1688 518 Pfam Galactose oxidase, central domain 37 85 - -
Aed8g1688 518 Pfam Galactose oxidase, central domain 139 189 - -
Aed8g1688 518 PANTHER OS01G0300900 PROTEIN 1 197 - -
Aed8g1688 518 PANTHER OS01G0300900 PROTEIN 215 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1688 Aed-Chr8 22018419 22022193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1688 55 197 Acyl Lipid Metabolism Gene Families AT3G05420 40.278 1.03e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1688 K20285 - gmx:100796366 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1688 8 22018419 22022193 Aed8g1688 8 22018419 22022193 ECH
Aed2g2402 2 27105933 27110085 Aed8g1688 8 22018419 22022193 PCT