Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2402 ATGAGTTCTTCGCTACCTCAACTGGCCAAGAACAAAGCAATGTGGCTGCATCCAAAGGTTTTGGGTTTTAATCCTTCTGAGAGATGGGGGCACTCTGCTTGCTTCTCCAAGGGGCTTATGTATGTCTTTGGGGGCTGTTGTGGGGGACTGCATTTTTGCGATGTTCTGACATTGGACCTTAACAAAATGGTTTGGAGCCAGCTTGGTACGACGGGTGAAAAGCCAGGGCCTAGAGATAGCCACAGTGCTGTTGTTGTGGGGCATAAAATGATAGTGTTTGGTGGCACTAACGGGTTCAAGAAGGTGAATCACATTCATATACTTGATCTTGTTACTAAAGAGTGGGTTCGACCAGAGTGCAAAGGGACTCCTCCTTCTCCACGTGAAAGCCACACTGCAACACTTGTTGGTGATGATAGAATAGTGATATTTGGTGGTAGTGGAGAAGGTCATGCTAACAATTTAAATGATTTGCACATTCTTGACCTTCGAACCATGACTTGGACTTCCCCTGAGTTGAAAGGTGATTTGCCTGTCCCTAGGGACAGTCATAGTACCCTTGCAATTGGTAACAAGCTTGTTGTCTATGGTGGAGACTCCGGTGATCAGTATCATGGCAATGTTCATATGCTTGATATGACATCAATGACTTGGTCTCAATTGTCAATTCAAGGTTCTCCACCAGGAGTCAGGGCAGGTCATGCTGCAGTGAACATTGGAACAAAGGCAAGTTTTAAAGTATTAGAGGTATATGAATTGTACATGATGTGTGGAGAAGATGAACGTCCTCTCAATGAATTGTTAGTGTTGCAGCTTGGAGCAGGGCATCCAAATGGACCTTACTACATTCCCATGTGCAAACCTTTGGGAACCAATTGGAATCAAGAAAAGAGGATTATCGCAGGAGAAGCAGATACCAATTCGAAGAGGAGGATAATTGCTGCTGCAAAGGTGTGGGATGTTGAATCAGAACAAGAAGAAAACTTTCTTACATTGTCCCTTCATTCATCTCCATATCAATCCGATCAAGAACAGACCCCAAGTCAAAAAGCAAATGCATTATTCCCATCCACTTGCCAACATGACAATGGCTCAAATTATAAAAGGAATTTGAAGAATATCCCACTTAAAACTTCACAAGATCTTCGTTTCCTACAACATCAACTAAAACAAGAACATTGCCTTTATATTCATGAGGATAGAAAAAGAGCTCAACTTCAGGCTGCAGAGCAGAAATCCATCGGGCGAGGACCCATTCAACACCTGATTGGTGGTGAAGTTCGGGGGAGAGTTGATGGACCCTTCGACTCAGTTTCTCTCTCTCCTACAGCTGTGAATGGAAGGGTTTTCAGGGGAGTCATATTTTCACCTGGAACAGGAGTTGTCTCAAAAGGGGGAAGTGTGAAACCAAATGGTTCTTTTCCTTCTTCCTCTCAAACATTTTTGAACTCCAATAATCATGTGGGTAATTTAAGGGCTTCCCAACAAGCAGCTATTCGTTTGCATGCAGAGCCATGCCATGGTTCGCGGCAAACCCCAGTGGCATTACCATTTCCAATCATGCGAGGCACTCCAAGTGTTGTTTCCAAGGAGCATAAAATCAACAGTGACCACCTTCAAGGGTTGGTTTTAACACTTGGAGGACCTGCTAGTGGACATCCTCAGGTCAAACATTGA 1677 0.4401 MSSSLPQLAKNKAMWLHPKVLGFNPSERWGHSACFSKGLMYVFGGCCGGLHFCDVLTLDLNKMVWSQLGTTGEKPGPRDSHSAVVVGHKMIVFGGTNGFKKVNHIHILDLVTKEWVRPECKGTPPSPRESHTATLVGDDRIVIFGGSGEGHANNLNDLHILDLRTMTWTSPELKGDLPVPRDSHSTLAIGNKLVVYGGDSGDQYHGNVHMLDMTSMTWSQLSIQGSPPGVRAGHAAVNIGTKASFKVLEVYELYMMCGEDERPLNELLVLQLGAGHPNGPYYIPMCKPLGTNWNQEKRIIAGEADTNSKRRIIAAAKVWDVESEQEENFLTLSLHSSPYQSDQEQTPSQKANALFPSTCQHDNGSNYKRNLKNIPLKTSQDLRFLQHQLKQEHCLYIHEDRKRAQLQAAEQKSIGRGPIQHLIGGEVRGRVDGPFDSVSLSPTAVNGRVFRGVIFSPGTGVVSKGGSVKPNGSFPSSSQTFLNSNNHVGNLRASQQAAIRLHAEPCHGSRQTPVALPFPIMRGTPSVVSKEHKINSDHLQGLVLTLGGPASGHPQVKH 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2402 558 PANTHER OS01G0300900 PROTEIN 253 308 - -
Aed2g2402 558 PANTHER OS01G0300900 PROTEIN 306 552 - -
Aed2g2402 558 Pfam Galactose oxidase, central domain 39 85 - -
Aed2g2402 558 Pfam Galactose oxidase, central domain 138 189 - -
Aed2g2402 558 Pfam Galactose oxidase, central domain 190 237 - -
Aed2g2402 558 Pfam Galactose oxidase, central domain 87 135 - -
Aed2g2402 558 SUPERFAMILY Kelch motif 20 242 IPR015915 GO:0005515
Aed2g2402 558 Gene3D - 10 274 IPR015915 GO:0005515
Aed2g2402 558 PANTHER KELCH REPEAT DOMAIN 253 308 - -
Aed2g2402 558 PANTHER KELCH REPEAT DOMAIN 306 552 - -
Aed2g2402 558 PANTHER OS01G0300900 PROTEIN 1 243 - -
Aed2g2402 558 PANTHER KELCH REPEAT DOMAIN 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2402 Aed-Chr2 27105933 27110085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2402 15 240 Acyl Lipid Metabolism Gene Families AT3G05420 34.034 2.76e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2402 K20285 - gmx:100801275 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2402 2 27105933 27110085 Aed8g1688 8 22018419 22022193 PCT