Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1623 ATGTCTCCTAAGATCACTGACGGTGGCCATGGGCGTGGCTACGTGAGCTTCCTCGCCGGAAGCGGTGACTACGTGAAAGGTGTGGTTGGGTTGGCGAAAGGCCTGAGGAAGGTGAAGAGCAAGTACCCTCTGGTGGTTGCAGTGTTACCCGATGTTCCCGAAGAGCACCGCAACATTCTCACCTCCCAAGGCTGCATTGTTAGACAAATCGAACCCGTGTATCCCCCAGAGAATCAAACCCACTTTGCCATGGCTTATTACGTCATCAACTATTCCAAGCTTCGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATATACCTAGACGGTGATATCCAAGTGTTTGAAAACATTGACCACTTGTTCGACTTGCCTGATAACTACTTCTACGCTGTGAAGGACTGTTTCTGTGAGCCCACTTGGGCCCACACTCCGCAGTATCAGATCGGTTACTGCCAGCAGTGCCCTCTTAAGGTTCAGTGGCCCACTCACTTTGGGCCCATGCCTCCTCTCTACTTCAATGCTGGCATGTTTGTTTATCAGCCCAATTTGGCCACCTACCGTGACCTACTTCAAACACTGCAAGTCACCAAGCCCACTTCCTTTGCTGAACAGGATTTTTTGAACATGTACTTCAAGGAGAAATATAAGGCGATTCCTAATGTGTACAATCTAGTGCTGGCCATGCTGTGGCGTCACCCTGAGAATGTTGAACTTGACAAAGTTAAAGTGGTTCATTACTGTGCTGCTGGATCAAAGCCTTGGAGGTACACTGGGAAGGAAGAGAACATGGAGAGAGAAGATATAAAGAAGTTAGTGAAGAAGTGGTGGGATATATATGAGGATGAGACTTTGGACTATGAAAACATGGATAGGTTCAATTCGGCACTTTTGGAGGTTGGTGAAGCCAAGTTCATCCGTGCCCCATCCGCAGCTTAG 939 0.4814 MSPKITDGGHGRGYVSFLAGSGDYVKGVVGLAKGLRKVKSKYPLVVAVLPDVPEEHRNILTSQGCIVRQIEPVYPPENQTHFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDNYFYAVKDCFCEPTWAHTPQYQIGYCQQCPLKVQWPTHFGPMPPLYFNAGMFVYQPNLATYRDLLQTLQVTKPTSFAEQDFLNMYFKEKYKAIPNVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMEREDIKKLVKKWWDIYEDETLDYENMDRFNSALLEVGEAKFIRAPSAA 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1623 312 Pfam Glycosyl transferase family 8 17 258 IPR002495 GO:0016757
Aed8g1623 312 SUPERFAMILY Nucleotide-diphospho-sugar transferases 17 287 IPR029044 -
Aed8g1623 312 PANTHER GALACTINOL SYNTHASE 10 9 294 IPR030515 GO:0006012|GO:0047216
Aed8g1623 312 CDD GT8_Glycogenin 14 282 - -
Aed8g1623 312 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 13 289 IPR029044 -
Aed8g1623 312 PANTHER GLYCOGENIN SUBFAMILY MEMBER 9 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1623 Aed-Chr8 21319276 21320985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1623 8 312 Glycosyltransferase AT1G56600 74.214 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1623 K18819 - gmx:548050 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2389 2 27031740 27034128 Aed8g1623 8 21319276 21320985 PCT