Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2389 ATGGCACCTAACATGACCACCGTTGTTGCGAATGGCACCACTGAACAACCCAAAGGCCATGGAGGAAGTGATCGTGCCTTTGTGACTTTTCTGGCTGGGAACGGTGATTACGTAAAGGGTGTTGTGGGTTTGGCCAAAGGACTGAGGAAGGCGAAAACCATGTACCCTTTGGTGGTTGCTGTGTTACCCGATGTTCCTGAAGAGCACCGTGAGATTCTCAAATCACAAGGTTGCATTGTGAGGGAGATTGAGCCTGTGTACCCTCCCGAGAACCAGACCCAATTCGCCATGGCCTATTATGTCATCAATTACTCCAAGCTACGTATTTGGGAGTTTGTGGAGTACAAGAAGATGATATACCTAGACGGTGACATCCAAGTATTTGAAAACATTGACCACCTGTTTGATCTGCCTGATAATTATTTCTATGCGGTTATGGATTGTTTCTGCGAGAAGACTTGGAGCCACACCCCTCAACACAAGATTGGGTACTGCCAACAGTGCCCTGATAAGGTTCAATGGCCTTCTCACTGTGGTCCCAAACCTCCTCTCTATTTCAATGCTGGCATGTTTGTTTATCAGCCTAATCTTGATACCTACCGTGATCTTCTCCAAACTGTTCAACTCACCACCCCCACTTCCTTTGCTGAGCAGGACTTTCTGAACATGTACTTCAAAGACAAGTACAAGCCCATACCGAACGTGTACAACCTTGTGCTGGCCATGTTGTGGCGTCACCCCGAGAATGTTGAACTTGATAAAGTTCATGTGGTTCATTACTGTGCTGCTGGGTCTAAGCCTTGGAGGTTCACTGGGAAGGAAGAGAACATGGACAGAGAAGATATCAAGATGCTTGTGAAGAAGTGGTGGGACATATATGAAGATGAGACACTGGACTACAATAACAACTCTGTCGTCGATGTCGAACGTTTCACTTCGGCAATGTTGAATGCTGGGGGCTTTCACTTTGTGCCAGCACCTTCTGCTGCCTAA 993 0.4693 MAPNMTTVVANGTTEQPKGHGGSDRAFVTFLAGNGDYVKGVVGLAKGLRKAKTMYPLVVAVLPDVPEEHREILKSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYKKMIYLDGDIQVFENIDHLFDLPDNYFYAVMDCFCEKTWSHTPQHKIGYCQQCPDKVQWPSHCGPKPPLYFNAGMFVYQPNLDTYRDLLQTVQLTTPTSFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELDKVHVVHYCAAGSKPWRFTGKEENMDREDIKMLVKKWWDIYEDETLDYNNNSVVDVERFTSAMLNAGGFHFVPAPSAA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2389 330 PANTHER GALACTINOL SYNTHASE 2 1 330 - -
Aed2g2389 330 CDD GT8_Glycogenin 25 295 - -
Aed2g2389 330 MobiDBLite consensus disorder prediction 1 21 - -
Aed2g2389 330 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 297 IPR029044 -
Aed2g2389 330 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 302 IPR029044 -
Aed2g2389 330 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 330 - -
Aed2g2389 330 Pfam Glycosyl transferase family 8 29 270 IPR002495 GO:0016757
Aed2g2389 330 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2389 Aed-Chr2 27031740 27034128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2389 1 330 Glycosyltransferase AT1G56600 74.852 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2389 K18819 - gmx:100800249 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2389 2 27031740 27034128 Aed8g1623 8 21319276 21320985 PCT