Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1614 ATGGCCAAGGAAGCTTTTCTGTGCCTCTTGTTTCTCTTCTCCTTTCTCACTATCTCTTGTTCTGGATCGCTTGTGGGAACTTCAACATCTGCTAGAACTATATCAGTCCTCAAGAAAAGCAACGTTTCGCCGTCTCAGATTCGAGTTTTTGTCACAGATCATAGGATTTTGAGTACTCTTAGCAACTCCAAAGTGCCAACTGATGTCTACTTGAACAAAAGTCAAGTTGAAAGTTTCATTACTTCAAAACCCTCTGAACTAAAAGCTCAGCTTCTCAACTTTCTTCCACATCCAAACCTCAAGAGCATCATTGCTAGCTGTGGCAGTGAGTGCTTAGCACAAAAAAATGAGATGCCTTTGTTCTTACATGCTTTGAAATCAATTGGCTCAGCCCTCAGAGAGCTTCCCTTGGGGAGGGAGGTAAAAATCTCAGTAGCATTTCCACTTTCATTCTTAGAAAAGTTGAATGCATCGCATGAAAACAGTATTCGTAGGATTCTTTCATTTTTAAAGGAAATGAAATCCTTTGTCATGGTAGAAGACAACATTGATGGAGAATTAAGCATGGAGGATCACTTTGTTCATGCTATGATCCAACGAGCCACTCTTGCTGCTTCAATTCTTCCTTGCAAGGATGTTCCCATTGTTCTGGCAATTAAAAGCACAGTTATCTTCCCTTCAATGGAATTAGAATTAGCAAAATTTAGTGAGAGAGTGTCCAAATATCTAGAATCCAAAACTCATATTACAAAAAGAATAGCTGCATTATACATAGAGGTGCATTCAACAGAAGATTTTGCTAGTAAAGAACTCAAAAGGAGAAGAAGTCTTGATGACACAACCAACCCATCAAACACAGTTTTCCCCACAAATCCAACATCATCATCCACACCAATCATCACACCACCAGATACACCAACCATCATAACGGTTCCTGCCACAAATCCTGTCACAATTTCCCCTTCAAATCCTGCTGCAATGCCTGTGACAGTTCCTTCAACAACACCAGTGCCTATACCTCCCACAAATCCAGCCAATTCACCAGTACCAGTGAGCAATCCAGCTACAACAACTCCTATAACGACACCGCCACCCGTAACCAACCCTGTGACTTCTTATCCACCTCCATCAGGAAGTGTTCCATTCGTAAACCCGCAACCACAACCGCCTCCTGCAAACATTAATGCTCCTGCCATTCAGGGGCAGAGTTGGTGTGTGGCAAAGCAAGGAGCCCCTGAGGCTTCTCTTCAATCAGCACTGGACTATGCTTGTGGAATGGGTGGGGCAGATTGTTCTCAGATTCAGCAGGGTGGGAGTTGTTACAGTCCAGTGACTTTGCAGAGCCATGCTTCTGTTGCCTTCAACAGCTACTACCAGAAGAATCCTGCTCCAACAAGCTGCACCGGATCGTGCATCTTCTCATCATCATCATCATCAACAACAACAACAACAACGCCGAAGTCATCACCCCCAACACCACCTACAATATCAAGTCCAACAATACTAGCACCACCAAGTCCAACACTTGCACCCTCAATTACAACAGCACCATCAATTCCAACAGCACCACCAACAACATCCACATCTTCAGGAACAGGCCCTTTCGGGTATGGTGCCCCACCTTCAGTGTTAAACTCAAGCAACCCAGCAGCCTCAGGTACAATGCCAGGTTTTGCGACTGATAGCCCTCCTGTTGTAAACACCACATCGGCCTCACATTCTGTGCGTTTGAAACCTTTTGTTGGCATTGTTCTGGTGGTATCATTTGTCACTACGAGACTCAGTATGAAGAACATAGTATGA 1803 0.4404 MAKEAFLCLLFLFSFLTISCSGSLVGTSTSARTISVLKKSNVSPSQIRVFVTDHRILSTLSNSKVPTDVYLNKSQVESFITSKPSELKAQLLNFLPHPNLKSIIASCGSECLAQKNEMPLFLHALKSIGSALRELPLGREVKISVAFPLSFLEKLNASHENSIRRILSFLKEMKSFVMVEDNIDGELSMEDHFVHAMIQRATLAASILPCKDVPIVLAIKSTVIFPSMELELAKFSERVSKYLESKTHITKRIAALYIEVHSTEDFASKELKRRRSLDDTTNPSNTVFPTNPTSSSTPIITPPDTPTIITVPATNPVTISPSNPAAMPVTVPSTTPVPIPPTNPANSPVPVSNPATTTPITTPPPVTNPVTSYPPPSGSVPFVNPQPQPPPANINAPAIQGQSWCVAKQGAPEASLQSALDYACGMGGADCSQIQQGGSCYSPVTLQSHASVAFNSYYQKNPAPTSCTGSCIFSSSSSSTTTTTTPKSSPPTPPTISSPTILAPPSPTLAPSITTAPSIPTAPPTTSTSSGTGPFGYGAPPSVLNSSNPAASGTMPGFATDSPPVVNTTSASHSVRLKPFVGIVLVVSFVTTRLSMKNIV 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1614 600 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 135 563 - -
Aed8g1614 600 MobiDBLite consensus disorder prediction 487 506 - -
Aed8g1614 600 MobiDBLite consensus disorder prediction 507 556 - -
Aed8g1614 600 Pfam X8 domain 404 475 IPR012946 -
Aed8g1614 600 SMART X8_cls 403 490 IPR012946 -
Aed8g1614 600 MobiDBLite consensus disorder prediction 475 556 - -
Aed8g1614 600 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Aed8g1614 600 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 135 563 IPR044965 GO:0004553|GO:0005975
Aed8g1614 600 MobiDBLite consensus disorder prediction 271 301 - -
Aed8g1614 600 MobiDBLite consensus disorder prediction 280 301 - -
Aed8g1614 600 Gene3D Glycosidases 25 184 - -
Aed8g1614 600 Gene3D - 398 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1614 Aed-Chr8 21249904 21254258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1614 32 477 Glycoside Hydrolase AT2G05790 26.415 1.87e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1614 - - gmx:100781884 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1614 8 21249904 21254258 Aed8g1614 8 21249904 21254258 ECH
Aed2g2375 2 26927939 26931010 Aed8g1614 8 21249904 21254258 PCT