Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2375 ATGGCCAAGGAAGCTTCTCTATGCCTTTTGTTCCTCTCTTTTCTCATTATCTTCTCTTCGGGAACAGGAACTGCTTCTTCAACATTCTTTGAAAAAAGCAAGATCTCCAAATCTGAGATTCGGTTTTCTGTGTCAGATTATAAGATTCTGAGCACTCTCACCAACACCAACCTGTCAGTTGATTTCTTCTTAAATGAAAGCCTCGTTCAAAGTTTCGTTCCTTCAAAATCCTCTGTAGTTTCATGGCTAGAAATTCATCTTATGAACATTCTTCCACAAGTTGACCTCAGAAGCATCACTGTTAACTGTGGCATTGAGTGCTTGGGCCAAGATGAGATGCCTTTACTCACACCTATTCTGAAATCGATTCATTCATTTCTCAGCAATCTTCAACTGAGAAGGGAAATAAAAGTTTCTGTGGCGTTTCCACTTCCACTCTTGGAGAATTTGAATGCATCATATGAAAATGATCTCCTTAGGATTGTTATGTTTTTGAAGAATATAGATTCGTTTATCATGGTAGAAGATATCATTGATGGGGAATTGAACACTGTTCAGTCAGTTATTGAAAGAGCTACCCTTGCTGCTTCTATTCTTCCTTGCAAAGATGTTCCTGTGGTTATCACAATCAAGAGCCATGATATTCCTAAGTCAGTTGAATTAGCTCAATTGAGTGAGGCATTATCCAAATATCTTGAAGAAGCAGGATCTCATATTACAAAGAGAATAGTTGCATTGTATGCAGAAGCACACACCACCAATGATTTTGTACTGCTCAAAAGAAAAGAGATTTTATTTCCTCTGTCCCTAAGAGAAGAAAATCCAAGCAAAGTCCACATCAGAAGAGCTCTACAAGACACAACAACCACAGTTTTCCCCACAAATCCAACCCCACCTTCACCAGTAATCACAACACCAGATACACCAGCCATCATAACAGTTCCTTCCACCAATCCTGTCACAGTTTCCCCCACAAATCCAGCTTCAATTGTTCCCTTGGCCCCTACAAATCCAGTTACGAACCCTGTGACCTCTTCTTCTTCTTCTTATCCACCACCATCAGGAGGAAGTGTTCCTGTCACAAATGCACTGCCTCCTCCTCCAAGCACAACTGCTCAAGCCATGCCAGGGGGCCAGAGTTGGTGTGTGGCAAAGACTGGAACTCCAGAAGCTTCTCTTCAAACAGCGCTGGACTATGCTTGTGGAATGTCAGGTGTGGATTGCTCACAAATACAGCAAAGTGGGAGCTGTTACAATCCAAATTCACTACAAAACCATGCTTCTTTTGCCTTTAACAGCTACTACCAAAAGAATCCTGCGCCAACAAGCTGTGACTTTGGTGGCACTGCCACCGTAGTGAACACCAATCCGAGCTCGGGTTCTTGCATTTTCCCATCATCATCATCTTCAGGGGCAGGCACATCCGGCTCCTCTGGTACTGGTGGCCCAGTTTTAGGTTCCCAAAGCCCTCCTGATTTAAACACCTCCTCATATTCAGCTGGTCTGAGACCTCTTCTTGGCTGCATGGTTCTGGCAATATCATTAGTCACTGTAAGACTCACCACATGA 1569 0.4296 MAKEASLCLLFLSFLIIFSSGTGTASSTFFEKSKISKSEIRFSVSDYKILSTLTNTNLSVDFFLNESLVQSFVPSKSSVVSWLEIHLMNILPQVDLRSITVNCGIECLGQDEMPLLTPILKSIHSFLSNLQLRREIKVSVAFPLPLLENLNASYENDLLRIVMFLKNIDSFIMVEDIIDGELNTVQSVIERATLAASILPCKDVPVVITIKSHDIPKSVELAQLSEALSKYLEEAGSHITKRIVALYAEAHTTNDFVLLKRKEILFPLSLREENPSKVHIRRALQDTTTTVFPTNPTPPSPVITTPDTPAIITVPSTNPVTVSPTNPASIVPLAPTNPVTNPVTSSSSSYPPPSGGSVPVTNALPPPPSTTAQAMPGGQSWCVAKTGTPEASLQTALDYACGMSGVDCSQIQQSGSCYNPNSLQNHASFAFNSYYQKNPAPTSCDFGGTATVVNTNPSSGSCIFPSSSSSGAGTSGSSGTGGPVLGSQSPPDLNTSSYSAGLRPLLGCMVLAISLVTVRLTT 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2375 522 Pfam X8 domain 381 451 IPR012946 -
Aed2g2375 522 Gene3D - 374 472 - -
Aed2g2375 522 MobiDBLite consensus disorder prediction 358 372 - -
Aed2g2375 522 MobiDBLite consensus disorder prediction 332 356 - -
Aed2g2375 522 Gene3D Glycosidases 24 176 - -
Aed2g2375 522 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 127 482 IPR044965 GO:0004553|GO:0005975
Aed2g2375 522 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 127 482 - -
Aed2g2375 522 MobiDBLite consensus disorder prediction 332 376 - -
Aed2g2375 522 SMART X8_cls 380 464 IPR012946 -
Aed2g2375 522 MobiDBLite consensus disorder prediction 468 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2375 Aed-Chr2 26927939 26931010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2375 38 467 Glycoside Hydrolase AT2G05790 25.210 4.05e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2375 - - gmx:100789503 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2375 2 26927939 26931010 Aed8g1614 8 21249904 21254258 PCT