Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1568 ATGGCATCATCATTCTCATTATTTCCTTCTAATAAGGTTATCTTTCTCTCTACCTTCTTACTATTATTATGCTTTGCTATAGCTGAAGCTCGTAAATCATCACCCAACATTTCTTCTCTAATTAACAAAGAGCTTTTTGATTCCATTTTCATACACAAAGACAACAACGCGTGCCCTGCGAGAAACTTCTACACCTACGACTCCTTCATCAGTGCATCCAAACGCTTCCCTAGATTCGGAACCACTGGCAGTACAACCACACGCAAGCGTGAGATTGCTGCATTTCTTGCTCAGATTTCACATGAAACCACTGGTGGGTGGGCCACTGCACCCGATGGACCCTATGCTTGGGGACTCTGTTTCAAGGAAGAAATTAGTCCTCAGAGTGACTATTGTGATTCCACCAACCAACAATGGCCTTGCTCTCCCGGCAAAACTTACAAAGGCAGAGGCCCAATTCAACTCTCATGGAATTACAACTATGGGCCAGCAGGGAAGGCCTTGGGATTTGATGGATTGGGAAACCCAGATGTGGTGTCAAACAATTCATTGATTGCCTTTCAAACAGGTCTCTGGTTTTGGATGACAGAGCAAAAGCCAAAACCTTCTTGCCACAATGTTATGGTTGGAAAATATGTGCCAACACAAGCTGATGTAGCAGCAAATCGAACTACAGGGTTTGGCCTGGTCACTAACATAATCAACGGTGGACTTGAGTGTGGAATTCCTGATGATTCAAGGGTCAATGATCGGATTGGATACTTCAAAAGATATGCAACATTGTTTAATGTAGATACAGGACCTAACTTGGATTGTGCATATCAGAAATCTTTCTAA 837 0.4289 MASSFSLFPSNKVIFLSTFLLLLCFAIAEARKSSPNISSLINKELFDSIFIHKDNNACPARNFYTYDSFISASKRFPRFGTTGSTTTRKREIAAFLAQISHETTGGWATAPDGPYAWGLCFKEEISPQSDYCDSTNQQWPCSPGKTYKGRGPIQLSWNYNYGPAGKALGFDGLGNPDVVSNNSLIAFQTGLWFWMTEQKPKPSCHNVMVGKYVPTQADVAANRTTGFGLVTNIINGGLECGIPDDSRVNDRIGYFKRYATLFNVDTGPNLDCAYQKSF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1568 278 Pfam Chitinase class I 40 272 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aed8g1568 278 SUPERFAMILY Lysozyme-like 36 278 IPR023346 -
Aed8g1568 278 CDD chitinase_GH19 41 272 - -
Aed8g1568 278 Gene3D Endochitinase, domain 2 123 181 - -
Aed8g1568 278 PANTHER CHITINASE-RELATED 16 278 - -
Aed8g1568 278 ProSitePatterns Chitinases family 19 signature 2. 185 195 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aed8g1568 278 ProSitePatterns Chitinases family 19 signature 1. 58 80 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aed8g1568 278 PIRSF Endochitinase 15 278 IPR016283 GO:0004568|GO:0005975
Aed8g1568 278 Gene3D - 44 278 - -
Aed8g1568 278 PANTHER CHITINASE 10 16 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1568 Aed-Chr8 20910586 20912781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1568 9 278 Glycoside Hydrolase AT1G02360 68.727 8.17e-148 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1568 - - gmx:100785397 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2335 2 26648310 26649202 Aed8g1568 8 20910586 20912781 PCT