Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2335 ATGACATTAGCCTCATCAGTTATTCCCTTATTGATTCTTGTCTACTCTGCATCATCAGCATGGACCACCTCGCCCTACATACCCGTGGTCTCTTCTCTCATCAACAAAACTCTCTATGACACATTTTTCCTACACAAAGATGACACTGTATGCCCTGCCAAGGACTTCTACCCCTACAACGCCTTCATTCGCGCATCCAAATTCTTCCCTGCATTTGGTAGCACCGGGTGTTTAGACACACGCAAGCGTGAGATCGCTGCTTTTCTCGCTCAGATTTCCCATGAAACCACCGGCGGCTGGGCCACCGCACCTGACGGCCCATTCGCTTGGGGCCTCTGCTTCAAGGAAGAAATTACTCCCCAGTCTAATTACTGTGATTCCACTAACACCCAATGGCCTTGCTTCCTGGGCAAAACTTACAAGGGTAGAGGTCCCATTCAACTTTCTTGGAACTATAACTATGGTCCAGCAGGGAAGGCGTTGGGTTTTGATGGGCTGAGGAACCCAGAGATTGTGGCCAACAACTCCGTCTTAGCTTTCAAAACTGCTCTCTGGTTTTGGATGACAGAGCAAAAGCCCAAACCTTCATGCCACGATGTCATGGTTGGAAAGTATGTGCCAACAAAAGCTGACATAGCAGCGAATCGAACAGTAGCGGGTTATGGCTTGGTCACTAACATAATCAATGGTGGACTCGAATGTGGGATTCCTGGCGATGCAAGAGTCAATGATCGGATTGGGTTTTTCCAAAGGTATACCAAGTTCTTCAACGTCGAAACTGGACCTAACTTGGATTGTGCATATCAGAAACCCTTCTAA 819 0.4774 MTLASSVIPLLILVYSASSAWTTSPYIPVVSSLINKTLYDTFFLHKDDTVCPAKDFYPYNAFIRASKFFPAFGSTGCLDTRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEITPQSNYCDSTNTQWPCFLGKTYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVANNSVLAFKTALWFWMTEQKPKPSCHDVMVGKYVPTKADIAANRTVAGYGLVTNIINGGLECGIPGDARVNDRIGFFQRYTKFFNVETGPNLDCAYQKPF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2335 272 PIRSF Endochitinase 16 272 IPR016283 GO:0004568|GO:0005975
Aed2g2335 272 PANTHER OS05G0138200 PROTEIN 28 272 - -
Aed2g2335 272 Pfam Chitinase class I 33 266 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aed2g2335 272 Gene3D Endochitinase, domain 2 116 174 - -
Aed2g2335 272 CDD chitinase_GH19 34 266 - -
Aed2g2335 272 PANTHER CHITINASE-RELATED 28 272 - -
Aed2g2335 272 ProSitePatterns Chitinases family 19 signature 2. 178 188 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aed2g2335 272 SUPERFAMILY Lysozyme-like 30 272 IPR023346 -
Aed2g2335 272 Gene3D - 37 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2335 Aed-Chr2 26648310 26649202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2335 30 272 Glycoside Hydrolase AT4G01700 76.132 5.63e-146 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2335 - - gmx:100784196 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2335 2 26648310 26649202 Aed8g1568 8 20910586 20912781 PCT