Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1458 ATGGGAAGTGGTGGCCGAAGCTCATCTCCTCCAAAACAGAAAAACTCAGTGGAAAACCCTTCAAAGAAGAAGCGCGTCCCACACGCAAAGCCACCCTTCACTCTAAGCCAACTAAAGAACTCCATCCAGCCACACTGTTTCCACCGCTCCGCCCTCCGCTCATTATCCTACGGCTCATTCCTAACCGGGCTTTGGGTCATCGCTCACGAGTGCGGCCACCACGCCTTCAGCGACCACCAATGGCTCGACGACACGGTCGGTCTGATCCTCCACTCATTCCTCCTCGTCCCGTACTTTTCATGGAAATACAGCCACCGCCGCCACCACTCCAACACCGCGTCGCTGGAACGCGACGAAGTGTTTGTCCCAAAAACAAAATCCAGCGTTGGTTGGTACTCGAAATACCTCAACAACCCGCCAGGGAGGGTTCTTTCGCTTGCCATCACTCTAACCCTAGGCTGGCCACTTTACTTAGCCTTCAACGTTTCGGGTCGGAAATACGAGAGATTTGCATGCCACTACGACCCTTATGGCCCCATTTATTCAGACCGTGAAAGGCTCCAAATTTATCTCTCCGACGCTGGAATCCTCGCAATGTGTTTCGGTCTCTACAAGGTTGCCCTATCCAAAGGCCTTGTTTGGGTCGTTTGTGTTTACGGGGTGCCTTTGTTGGTCGTAAACGCTTTTTTGGTGCTCATAACTTTCTTGCAACACACGCACCCTTCGGTTCCGCACTACGATTCCACCGAGTGGGACTGGCTGAGAGGTGCATTGGCAACCGTTGATAGAGATTATGGATTTTTGAACAAGGTTCTTCATAACATTACGGACACACACGTGGCGCATCACTTGTTTTCCACGATGCCGCATTATCATGCGATGGAGGCTACCATGGCTATAAAGCCGATTTTGGGAGAGTATTATCACTTTGATGGGACTCCGATTTATAAGGCGATGTGGAGAGAGGCTAAAGAGTGCATGTATGTTGAGGCTGATGAAGGGTCTAATGGAAAAGAGAGGGATCTAGCGGAAGAAATCTATGCACCCAGAAGAGAGGCTTCAGATTATTCTGCTCGTATTGAGTGGTATACTCACGGAGTTACAGAGGTAACTAGTTACATAAACGCTGCGTTTCGTTCAGCGTCTAACAAAGACGAAGTCTACTTATTCCTGAAAAACAAGTATGTACTTCTGAACTATGCTCCGGGGACAACAAAAGACAAGATTGTGAATGGGCCTCTTCTCATTACCAAAGGGTTTCCATCGCTCATTGATACACCCTTTGGGGAGCAGGGAATAGAGTGTGCCTTCGAAACAACGAAAACTGAAGCGTTCATCTTCGCTGCAAACCTCTGTGTCCACATAGACTATGCCACGGGAACAACAATCTCAGGACCTAGCACAATCGCCGCCATGTTTCCGTTCTTGGCGCATACCGTATTCGAGCATGGCGTCGATGCTGCATTCAAATCAATAAAAAAGAATCAAGCGTACTTGTTCAGAGGCGACAAGTATGCTCGCATAAACTATGATTCCATGACATTCGTTGATGGCGGCGACGACGGCGGCGTTCGCAAAATCACCGACTGGTTTCCTAGTTTGCTAGGCACTGTCTTTGCAAGTGATATTGATGCAGCTTTCGCTTCTCACAGGAAAAATGAGGCCTACTTGTTCAAAGGTGAGTTGTACGCACTTATCAACTATGCTCCGGGAACCACTGATGACACCATTGTTGGTGGCAAAATAAAGTACATCCTTCCCACCAATTGGCCCTCTCTTCGTGGAACTTTGCCACTGATGAATAAGGGGCTTGACTTTTATGATCATGGTCATGCAGAAGATGATGACAACCCGCACCAGCACGATGAAGTTTGA 1875 0.4859 MGSGGRSSSPPKQKNSVENPSKKKRVPHAKPPFTLSQLKNSIQPHCFHRSALRSLSYGSFLTGLWVIAHECGHHAFSDHQWLDDTVGLILHSFLLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSSVGWYSKYLNNPPGRVLSLAITLTLGWPLYLAFNVSGRKYERFACHYDPYGPIYSDRERLQIYLSDAGILAMCFGLYKVALSKGLVWVVCVYGVPLLVVNAFLVLITFLQHTHPSVPHYDSTEWDWLRGALATVDRDYGFLNKVLHNITDTHVAHHLFSTMPHYHAMEATMAIKPILGEYYHFDGTPIYKAMWREAKECMYVEADEGSNGKERDLAEEIYAPRREASDYSARIEWYTHGVTEVTSYINAAFRSASNKDEVYLFLKNKYVLLNYAPGTTKDKIVNGPLLITKGFPSLIDTPFGEQGIECAFETTKTEAFIFAANLCVHIDYATGTTISGPSTIAAMFPFLAHTVFEHGVDAAFKSIKKNQAYLFRGDKYARINYDSMTFVDGGDDGGVRKITDWFPSLLGTVFASDIDAAFASHRKNEAYLFKGELYALINYAPGTTDDTIVGGKIKYILPTNWPSLRGTLPLMNKGLDFYDHGHAEDDDNPHQHDEV 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1458 624 Pfam Hemopexin 485 534 IPR018487 -
Aed8g1458 624 MobiDBLite consensus disorder prediction 1 16 - -
Aed8g1458 624 SUPERFAMILY Hemopexin-like domain 407 570 IPR036375 -
Aed8g1458 624 MobiDBLite consensus disorder prediction 1 33 - -
Aed8g1458 624 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 57 - -
Aed8g1458 624 Pfam Fatty acid desaturase 56 309 IPR005804 GO:0006629
Aed8g1458 624 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 58 338 - -
Aed8g1458 624 CDD Delta12-FADS-like 58 293 - -
Aed8g1458 624 Gene3D - 370 599 IPR036375 -
Aed8g1458 624 ProSiteProfiles Hemopexin repeat profile. 482 534 IPR018487 -
Aed8g1458 624 SMART HX_rpt_3 543 588 IPR018487 -
Aed8g1458 624 SMART HX_rpt_3 485 533 IPR018487 -
Aed8g1458 624 SMART HX_rpt_3 374 422 IPR018487 -
Aed8g1458 624 PANTHER OLEATE HYDROXYLASE FAH12 58 338 - -
Aed8g1458 624 PANTHER OLEATE HYDROXYLASE FAH12 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1458 Aed-Chr8 19499983 19505290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1458 1 338 Lipid Metabolism Gene Families AT3G12120 66.489 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1458 K10256 - gmx:100780912 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1458 8 19499983 19505290 Aed8g1458 8 19499983 19505290 ECH
Aed4g0376 4 2710042 2711193 Aed8g1458 8 19499983 19505290 PCT