Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0376 ATGGGGGCTGGTGGCCGCACAGCTGTTCCTCTTGCCAGCAGGAAGCCAGAGGCTGATCCCTTGAAGCGAGTGCCATTTGAAAAGCCTCCTTTTAGTCTCAGTCAGGTGAAGAAGGCCATTCCACCTCACTGTTTCCAGCGTTCTGTTCTCCGCTCATTCTCCTATGTCGTTTATGACCTCACCATAGCCTTCTGCCTCTATTATGTTGCCACCCATTACTTCCATCTCCTTCCCAGCCCTCTCTCTTTCGTTGCATGGCCAATCTACTGGGCTTTCCAAGGTTGCATCCTAACTGGTGTTTGGGTCATTGCTCATGAGTGTGGCCACCATGCATTCAGTGACTACCAGCTTCTTGATGATATTGTTGGCCTTGTTCTCCACTCTGCTCTCTTAGTCCCATACTTTTCATGGAAATACAGCCATCGCCGTCACCACTCCAACACCGGTTCTCTCGACCGGGATGAAGTGTTTGTGCCAAAGCAGAAATCTTCTATCAGCTGGTTCTCCAAATACCTTAACAATCCACTAGGCAGGGTCCTCACACTTGCCGTTACCCTCACACTTGGTTGGCCCCTCTACTTGACTTTTAATGTTTCCGGAAGGCCTTATGATAGATTTGCTTGCCACTATGACCCTTATGGCCCCATTTACTCTGATCGTGAACGACTTCAAATATATATATCAGATGCAGGAGTACTTGCAGTATCCTATGGCCTTTTCCGTCTTGCCATGGCAAAAGGGCTTCTCTGGGTGGTGTGTGTTTATGGAGTTCCATTGCTAGTGGTCAATGGATTTTTGGTGTTGATTACATTCTTGCAGCATACTCACCCTGCGTTGCCGCACTACAATTCCTCAGAGTGGGATTGGTTAAGAGGAGCTTTAGCAACAGTGGATAGAGATTATGGAATCCTGAACAAGGTCTTCCATAATATCACAGACACTCATGTAGCACATCACTTGTTCTCCACAATGCCACATTATCATGCAATGGAGGCTACAAAGGCAATAAAGCCCATCTTGGGAGAGTATTATCGGTTAGATGAGACTCCATTTGTGAAGGCAATGTGGAGAGAGGCAAGAGAGTGTATTTATGTGGAGCCAGATCAAAGTAGTGACAGAAAAGGTGTATTTTGGTACAACAAGAAGTTGTGA 1152 0.467 MGAGGRTAVPLASRKPEADPLKRVPFEKPPFSLSQVKKAIPPHCFQRSVLRSFSYVVYDLTIAFCLYYVATHYFHLLPSPLSFVAWPIYWAFQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLVLHSALLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKSSISWFSKYLNNPLGRVLTLAVTLTLGWPLYLTFNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVSYGLFRLAMAKGLLWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYNSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRLDETPFVKAMWREARECIYVEPDQSSDRKGVFWYNKKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0376 383 Pfam Fatty acid desaturase 85 345 IPR005804 GO:0006629
Aed4g0376 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 383 - -
Aed4g0376 383 CDD Delta12-FADS-like 47 329 - -
Aed4g0376 383 Pfam Domain of unknown function (DUF3474) 28 66 IPR021863 GO:0016717
Aed4g0376 383 PANTHER OLEATE HYDROXYLASE FAH12 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0376 Aed-Chr4 2710042 2711193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0376 1 383 Lipid Metabolism Gene Families AT3G12120 75.979 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0376 K10256 - gmx:100805040 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0376 4 2710042 2711193 Aed4g0376 4 2710042 2711193 ECH
Aed4g0376 4 2710042 2711193 Aed8g1458 8 19499983 19505290 PCT