Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1390 ATGACGGCAGCTGTGGTCGTCCCATTGGGCATCCTCTTCTTCGCTTCCGGCCTCATCGTTAACCTCATTCAGGCAATATGCTACGTGGTTGTGCGGCCGGTGTCGAAGAACATGTACCGGCGGATGAACAGGGTCCAAGTATTCACAGATGATGAAACCTTTCGTTTAATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGATTTTAGCTCAGCGTTCAGGTTGTCTTGGCAGCACTCTTGCTGTGATGAAGAAATCATCCAAGTTTCTACCGTCAGGCCTACAGCAACTGAGAGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACTCGCTTTACACAGGCCAAATTATTAGCTGCTCAAGAGTATGCAGCCTCAGCTGGATTGCCTGTTCCTAAAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCAGCAGTAAACAATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACACTGGCAATTCCCAAGAGTTCACCTGCTCCTACAATGCTCAGACTCTTCAAAGGGAAATCTTCAGTGGTGCATGTGCATATTAAGCGACATTCGATGAAGGATTTGCCAGAAGAAGATGAAGCTGTTGCTCAATGGTGTCGAGATATATTTGCCACTAAGGATGAGTTGTTCGACAAACATATAGCTGAGGACACATTCAGTGATCAAGAGCTGCAGGATACTGGACGACCAATTAAGTCTCTTGTGGTTGTCATATCTTGGGCTTGTGTGGTTGTTACGGGGGCCGTGAAGTTCCTCCAATGGTCTTCACTTCTATCTTCATGGAAGGGTGTTGCATTTTCAGCATTTGGTTTGGGAGTTGTGACTCTCCTGATGCACATCATGATCCAGTTCTCACAAGCTGAGCGTTCAACCCCTTCAAAGGTTGCCCCTGCAAAGTCTAGGGATGAGGGTGACAAACAAGACTAG 993 0.4572 MTAAVVVPLGILFFASGLIVNLIQAICYVVVRPVSKNMYRRMNRVQVFTDDETFRLMGKEHALVISNHRSDIDWLVGWILAQRSGCLGSTLAVMKKSSKFLPSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPVPKNVLIPRTKGFVSAVNNMRSFVPAIYDVTLAIPKSSPAPTMLRLFKGKSSVVHVHIKRHSMKDLPEEDEAVAQWCRDIFATKDELFDKHIAEDTFSDQELQDTGRPIKSLVVVISWACVVVTGAVKFLQWSSLLSSWKGVAFSAFGLGVVTLLMHIMIQFSQAERSTPSKVAPAKSRDEGDKQD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1390 330 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 102 323 - -
Aed8g1390 330 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 45 - -
Aed8g1390 330 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 44 102 - -
Aed8g1390 330 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 48 237 - -
Aed8g1390 330 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 44 102 - -
Aed8g1390 330 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 102 323 - -
Aed8g1390 330 SMART plsc_2 62 158 IPR002123 GO:0016746
Aed8g1390 330 Pfam Acyltransferase C-terminus 189 262 IPR032098 -
Aed8g1390 330 Pfam Acyltransferase 56 102 IPR002123 GO:0016746
Aed8g1390 330 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 1 45 - -
Aed8g1390 330 CDD LPLAT_LCLAT1-like 44 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1390 Aed-Chr8 18167133 18180113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1390 1 325 Miscellaneous Gene Families AT3G57650 65.591 2.77e-179 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1390 K13523 - gmx:100814107 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0427 4 3050548 3053213 Aed8g1390 8 18167133 18180113 PCT