Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0427 ATGGCTATTGCAGTTGCAGCGGTGGCTGTGGTGGTGCCATTGGGCCTTCTCTTCTTCGCCTCGGGCCTCCTTGTTAATCTCATTCAGGCTATATGCTACGTCGTTGTGAGGCCCGTGTCCAAGAATTTGTACAGACGGATCAACAGGGTAGTAGCAGAACTCTTGTGGCTCCAACTCGTGTGGCTTATTGATTGGTGGGCAGGAGTTAAGGTCCAAATATTCACAGATCATGAAACTTTTCGTTTAATGGGTAAAGAGCATGCACTTGTGATAAGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTCAGCTCAGCGTTCAGGTTGTCTTGGCAGCACTCTAGCTGTGATGAAGAAATCTTCAAAGTTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTAAGGTCAGGTATCCAACGACTGAGTGATTTCCCTCTTCCATTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAATATGCAACTTCCACTGGATTGCCTGTTCCTAGAAATGTTTTGATTCCAAGAACTAAGGTGAAATATAATTTGTTTTTGCCTTCTTTCCCCTTGCTTTTCCTTCCATGGATTGGAAGCCACATTGTGTTAATCTGGTCTAGGTATCAGTCTTAA 717 0.4449 MAIAVAAVAVVVPLGLLFFASGLLVNLIQAICYVVVRPVSKNLYRRINRVVAELLWLQLVWLIDWWAGVKVQIFTDHETFRLMGKEHALVISNHRSDIDWLVGWVSAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDESTLRSGIQRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKVKYNLFLPSFPLLFLPWIGSHIVLIWSRYQS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0427 238 CDD LPLAT_LCLAT1-like 60 207 - -
Aed4g0427 238 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 9 207 - -
Aed4g0427 238 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 9 207 - -
Aed4g0427 238 Pfam Acyltransferase 82 185 IPR002123 GO:0016746
Aed4g0427 238 SMART plsc_2 88 210 IPR002123 GO:0016746
Aed4g0427 238 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 39 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0427 Aed-Chr4 3050548 3053213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0427 5 207 Miscellaneous Gene Families AT3G57650 81.773 3.23e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0427 K13523 - gmx:100812696 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0427 4 3050548 3053213 Aed4g0427 4 3050548 3053213 ECH
Aed4g0427 4 3050548 3053213 Aed8g1390 8 18167133 18180113 PCT