Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1379 ATGGGGAAAGCACCTACATTCATTCAAGAACTGCAGAATGGTGGAACTAGCAATGGCCATGAATTACAAAGCGGGACTTTCGAGACGGAAACTATTGTTGGTGACAAAAAGTATGTCATTGGTGGAACCGATGGTGAAACTTTTTCCATTAAGGTTCAAATTCATGACAACAATGGTCTTGGGGAATGGGTTGATCTCATTGAGCTAGGCACCAAGCCCATTTCATGTAACGGCCACTCGGCCATGCTTTTGAAAGACCGGATACTAGTTCTTAAGAAAAATGCTAATCCAGATGATTCTATATGGTTTCTGGAGGTGGACACTCCATATGTTAGGCAGCAGAAGAAAATTTCCGGGACCGATGTCGTTGTTGCATGGAGTAAGGGTGTGATAGGAAATGCTGAGAAGCCTGTTGTTATCAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATAGCTATGCTCATGAAGGAATTCCCCTCTATGTTTGGTTTCTCTGTGAGCCACACAACCCGTGCCCCAAGAGGGATGGAGAAAGACGGGATCCATTACCATTTCACTGAGAGGAATGTTATGGATAAAGAGATTAAAGATGGAAAGTTTCTCGAGTTCGCTTCGGTCCATGGTAATCTATATGGGACCAGTGTTGAGGCTGTGGAGCTGGTATCAGATGCAGGGAAAACATGTATTCTCGATATTGATGTTCAAGGGGCAAGATACGTGCGGTCTAGTTCTCTAGAAGCCATGTTCATCTTTATCTGCCCTCCATCAATGGAAGAACTGGAGAAGCGTCTTCGTGACAGAGGGACAGAGACAGAAGAACAGATCCTAAAGCGGTTACGAAATGCTCAGGCCGAGATTGAGCAAGGGAAGTCATCAGGCATATTCGATCACATCTTATACAATGACAATCTTGAAGAGTGTTTCGAGAATCTGAAGACACTATTGGGACTTGATGGATATGTCACTCCTCCCAAATCCGCAACAAAAGAGATTAATCTCCCAAGGGATCATCATTCGGTGTCAAAAATTGATGACAAAATCATCATAAACTGCACCTCTTCAGAACTAGAAAAGGATTCAAAGAACTTGATCATGTTAGATGTCTCCTCACTCAAAGGGGGTGCACCTGGATGGACAAGAGGGATAGATTTTCAAGCCATTGACTCGTTTTCAGATAGCTTCAATGGCAATGGGAATGGACCAATTTGA 1212 0.4356 MGKAPTFIQELQNGGTSNGHELQSGTFETETIVGDKKYVIGGTDGETFSIKVQIHDNNGLGEWVDLIELGTKPISCNGHSAMLLKDRILVLKKNANPDDSIWFLEVDTPYVRQQKKISGTDVVVAWSKGVIGNAEKPVVISGPSGVGKGTLIAMLMKEFPSMFGFSVSHTTRAPRGMEKDGIHYHFTERNVMDKEIKDGKFLEFASVHGNLYGTSVEAVELVSDAGKTCILDIDVQGARYVRSSSLEAMFIFICPPSMEELEKRLRDRGTETEEQILKRLRNAQAEIEQGKSSGIFDHILYNDNLEECFENLKTLLGLDGYVTPPKSATKEINLPRDHHSVSKIDDKIIINCTSSELEKDSKNLIMLDVSSLKGGAPGWTRGIDFQAIDSFSDSFNGNGNGPI 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1379 403 Pfam Guanylate kinase 135 316 IPR008145 -
Aed8g1379 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 316 IPR027417 -
Aed8g1379 403 Gene3D - 131 319 IPR027417 -
Aed8g1379 403 SMART gk_7 134 320 IPR008145 -
Aed8g1379 403 ProSiteProfiles Guanylate kinase-like domain profile. 135 317 IPR008144 -
Aed8g1379 403 ProSitePatterns Guanylate kinase-like signature. 170 187 IPR020590 -
Aed8g1379 403 TIGRFAM guanyl_kin: guanylate kinase 136 315 IPR017665 GO:0004385|GO:0006163
Aed8g1379 403 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 342 - -
Aed8g1379 403 CDD GMPK 137 313 - -
Aed8g1379 403 PANTHER GUANYLATE KINASE-RELATED 1 342 - -
Aed8g1379 403 SUPERFAMILY Galactose oxidase, central domain 32 116 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1379 Aed-Chr8 18011778 18015784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1379 K00942 - gmx:100812658 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1379 8 18011778 18015784 Aed8g1379 8 18011778 18015784 ECH
Aed4g0437 4 3136035 3141695 Aed8g1379 8 18011778 18015784 PCT