Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0437 ATGGGAGAAGCACCAGCATTGCTTGTTGATGAAGTGCAGGATGGGGCTCTGAATGGCCTTGACTTAAAAAACGGAACTTGCAAAACAACTACTACCGTTGGTGACAAGACGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAATCATGGAGAATGGGTTCGTCCCACCGTGCGGGGCACCAAACCTGTCTCATGCAAAGGCCTCTCAGCAGTGCCTTTGGAAGACCGAATACTAATTCTCAAGAAGGGTTCCAAGCCAGATGATCAAATATGGTTCCTGGAGATTGACACCCAATATGTGAGGCAGCAGCAAAAATATTTGGGGACTGAGGTGGTTGCATGGAGTAAAGGTGTGATAGGCAATGCTGAGAGGCCTGTTGTTATTAGTGGTCCTTCTGGAGTTGGTAAAGGAACACTGATATCAATGCTTATGAAGGAATTCCCGTCCATGTTTGGCTTTTCTGTGAGCCACACCACCCGTGCTCCGAGAGATATGGAGAAAGATGGGGTCCATTACCATTTTACCGAGAAGAGTATAATGGAGAAAGAAATCGAAGAGGGGAAGTTTCTTGAGTTTGCTTCTGTCCATGGTAATCTGTATGGAACTAGTGTTGAGGCTGTTGAACTGGTAACAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGTGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATGTTCATTTTTATCTGTCCCCCATCAATGGAAGAGTTGGAGAAGCGCCTCCGTGACCGAGGGACAGAGACTGAGGAACAGATCCTGAAGCGACTGTGTAATGCTGAAGCTGAGATGGAGCAAGGGAAATCTTCTCACATATTTGATTTCATCCTATACAACGACAAACTTGAGGACTGTTACGAGAGACTTAAGAAACTATTGGGACTTGATGGTTTTGTCACTGCTCCACCTAAATCAGGCCCTATAGAGATTGATTTGCCAATGGACCATTCAGTGTCAAAAATTGATAACAAAATCATCATAAACCGCATCTCCTCAGGAGAGAAGGAATCAAAGAATTTGATCATTTTGGATGTTTCCTCACTAAAAGAGGGTGCACCTGGACGGACAAGAGGCCTAAATTTCCAAGCCATTGGCTCTTTCTCAAATGGCTTGAATGGGATAAATCAGCTTAGCTAA 1200 0.4417 MGEAPALLVDEVQDGALNGLDLKNGTCKTTTTVGDKTYVIGGADDGTLSIEVQIFDRNHGEWVRPTVRGTKPVSCKGLSAVPLEDRILILKKGSKPDDQIWFLEIDTQYVRQQQKYLGTEVVAWSKGVIGNAERPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRDMEKDGVHYHFTEKSIMEKEIEEGKFLEFASVHGNLYGTSVEAVELVTDAGKRCILDIDVQGARSVRASSLEAMFIFICPPSMEELEKRLRDRGTETEEQILKRLCNAEAEMEQGKSSHIFDFILYNDKLEDCYERLKKLLGLDGFVTAPPKSGPIEIDLPMDHSVSKIDNKIIINRISSGEKESKNLIILDVSSLKEGAPGRTRGLNFQAIGSFSNGLNGINQLS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0437 399 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Aed4g0437 399 TIGRFAM guanyl_kin: guanylate kinase 135 314 IPR017665 GO:0004385|GO:0006163
Aed4g0437 399 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 325 - -
Aed4g0437 399 PANTHER GUANYLATE KINASE-RELATED 1 325 - -
Aed4g0437 399 SMART gk_7 132 318 IPR008145 -
Aed4g0437 399 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Aed4g0437 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Aed4g0437 399 CDD GMPK 135 311 - -
Aed4g0437 399 Pfam Guanylate kinase 133 314 IPR008145 -
Aed4g0437 399 Gene3D - 129 317 IPR027417 -
Aed4g0437 399 SUPERFAMILY Galactose oxidase, central domain 20 112 IPR011043 -
Aed4g0437 399 Gene3D - 24 128 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0437 Aed-Chr4 3136035 3141695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0437 K00942 - gmx:100808931 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0437 4 3136035 3141695 Aed4g0437 4 3136035 3141695 ECH
Aed4g0437 4 3136035 3141695 Aed8g1379 8 18011778 18015784 PCT