Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1355 ATGTCTAGCTCAAAAGTTTTGGATCCTGCATTCCAGGGTGTTGGTCAAAGAACAATTCAAGGCAAAGGAGGTGCTTATTTTTATGATTTACACTTTTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACTGCAGCCATTAAAACTGTTGAACTTGATGCTGCTCTCGGAGGGCGTGCAGTGCAGCACAGGGAAATCCAAGGACATGAATCTGACAAGTTTTTGTCATACTTTAAACCATGTATTATACCATTAGAGGGTGGAATTGCATCTGGGTTTAAAAAACCAGAAGAAGAGGACTTTGAAACACGTTTGTATGTATGCAAAGGGAAAAGAGTTGTAAGATTGAGACAGGTCCCTTTTGCAAGGTCTTCATTGAACCATGAGGATGTATTCATACTAGACACTCAGGATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCAAAGGCTTTGGAAGTTATACAGTTTCTGAAAGAAAAATATCATGAAGGAAAATCTGACGTTGCAATTATTGACGATGGAAAATTAGACACTGAGTCAGACTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATTAGTGAGGATGATATTATTCCAGAGACAATTCCTGCTCAGCTTTATAGTATTGTTGATGGTGAGGTCAAGCCATTTGAAGGTGAACTTTCTAAATCACTGTTGGAAAACAACAAATGCTATTTACTGGACTGTGGTGCTGAGGTATTTGTCTGGGTTGGTCGCGTAACACAAGTTGAAGAACGAAAAGCAGCCTGCCAAGCCATTGAGGAGTTTCTTGCAAGACAAAAAAGGCCAAAATCTACAAGGGTAACCCAGATTATTCAAGGTCATGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCAGCGGCATCTGCTAGTACCAATGCTGAGGATGGAAGGGGAAAAGTTGCAGCATTGCTTAAGCAACAAGGTATGGGTGTGAAAGGAATGACAAAAAGTACCCCTGTAAATGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGGAAGATAGAGGCATGGCGAATCAATGGAAATGCCAAGACTGTATTGCCAAAGGAGGAGATTGGTAAATTTTATAGTGGAGATTGCTACATTGTACTATACACTTACCACTCTGGTGAGAGGAAAGAAGACTACTTCTTGTGCTGTTGGTTTGGCAAAGACAGTGTTGAGGTAGACCAAACAACGGCTACTAGGTTGGCCAATACAATGTCTACCTCATTAAAGGGTAGACCTGTACAGGGTCGCATATTTGAAGGAAAAGAGCCGCCACAGTTTGTTGCCATTTTCCAACCAATGGTGGTCCTCAAGGGAGGATTGAGCTCTGGATACAAGAAACTAATTGAAGACAAAGGTGTGTCAGATGAAACTTACACAGCAGAGAGTATTGCACTTATTCGAATTTCTGGAACTTCTATTCATAACAACTCATCAGTACAAGTTGATGCAGAGCCATCATCATTGAATTCTGCTGAGTGTTTTGTCCTGCAATCGGGCTCTACAATTTTCACTTGGCATGGAAATCAGTGTTCCTTTGAGCAGCAACAGCTAGCAGCAAAGGTTGCTGATTTTTTACGGCCAGGAGTTACTTTAAAGCATGCTAAAGAAGGAACAGAAAACTCAGCTTTCTGGTCTGCACTAGGAGGAAAACAAAGTTACACCAGCAAGAAAGTTGTTAACGAGGTAGAGGAGGTTTACAACTTCTCTCAAGATGACCTGTTGCCGGAGGATATCCTTATACTTGACACGCATGCTGAAGTATTTATTTGGATTGGTCATTCTGTAGACCCCAAAGAAAAGCAAAATGCTTTTGAAATTGGCCAGAAATACATACATTTGGCTGCATCTCTGGAGGGACTATCTCCACGTGTACCACTATATAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCATGGGATCATGCAAAAGCTATGGTTCTGGGGAACTCATTTCAGAAAAAGGTGGCACTATTCTTTGGACTTGGCAATGCTGTGGAGGAAAAGTCAAATGGCTCAAGTCTAGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTATCTAATGCATTTAGTTCATCTTCTGAGAAAGGATCCAGTATGACACAAGATAGATTGAATGGGTTAGGCCAAGGAGGACCAAGACAAAGGGCCGAAGCTTTAGCTGCTTTAAACTCTGCATTTAGTTCATCATCTGGGATGAAGAGTTTTTCTCCTAGGGCATCTGGAGGTGGTCCAGGATCACAAAGAGCTGCAGCAGTGGCTGCTCTTTCACAAGTTCTTACTGCTGAAAAGAAAAAATCACCGGATGGTTCTCCTGTTGCTGGTAGTAGTCCTATGACTGAAAGTAGTGCTACTGAAACTAAAAGTGACTCGTCTGAAGTTGCCGAAGCCAAGGAAACAGTGGAACTTCCCCCTGAGACCGGTAGCGAGGTGGATTTGGAACCAAAACAAGAAAATGTGGAGGAAGGAAATGATGATCAAAGCAGGTTCAGTTATGAACAATTAAAGACTAAAGCTGCTACTAATCTGCCTGGAGTTGATCTTAAACGAAGAGAGGCCTATCTGTCAGATGAAGAGTTCAGCACTATATTTGGAATGGCAAAAGAAGCATTTTACAAGTTACCAAGATGGAAGCAAGACATGCTGAAAAAGAAATACGAATTGTTCTAG 2754 0.4165 MSSSKVLDPAFQGVGQRTIQGKGGAYFYDLHFWIGKDTSQDEAGTAAIKTVELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGIASGFKKPEEEDFETRLYVCKGKRVVRLRQVPFARSSLNHEDVFILDTQDKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKSDVAIIDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPETIPAQLYSIVDGEVKPFEGELSKSLLENNKCYLLDCGAEVFVWVGRVTQVEERKAACQAIEEFLARQKRPKSTRVTQIIQGHETHSFKSNFDSWPAASASTNAEDGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGGGKIEAWRINGNAKTVLPKEEIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSVEVDQTTATRLANTMSTSLKGRPVQGRIFEGKEPPQFVAIFQPMVVLKGGLSSGYKKLIEDKGVSDETYTAESIALIRISGTSIHNNSSVQVDAEPSSLNSAECFVLQSGSTIFTWHGNQCSFEQQQLAAKVADFLRPGVTLKHAKEGTENSAFWSALGGKQSYTSKKVVNEVEEVYNFSQDDLLPEDILILDTHAEVFIWIGHSVDPKEKQNAFEIGQKYIHLAASLEGLSPRVPLYKVTEGNEPCFFTTYFSWDHAKAMVLGNSFQKKVALFFGLGNAVEEKSNGSSLGGPRQRAEALAALSNAFSSSSEKGSSMTQDRLNGLGQGGPRQRAEALAALNSAFSSSSGMKSFSPRASGGGPGSQRAAAVAALSQVLTAEKKKSPDGSPVAGSSPMTESSATETKSDSSEVAEAKETVELPPETGSEVDLEPKQENVEEGNDDQSRFSYEQLKTKAATNLPGVDLKRREAYLSDEEFSTIFGMAKEAFYKLPRWKQDMLKKKYELF 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1355 917 Pfam Gelsolin repeat 499 548 IPR007123 -
Aed8g1355 917 Pfam Gelsolin repeat 233 302 IPR007123 -
Aed8g1355 917 Pfam Gelsolin repeat 374 448 IPR007123 -
Aed8g1355 917 Pfam Gelsolin repeat 28 76 IPR007123 -
Aed8g1355 917 Pfam Gelsolin repeat 584 660 IPR007123 -
Aed8g1355 917 Pfam Gelsolin repeat 117 168 IPR007123 -
Aed8g1355 917 Gene3D Severin 485 574 IPR029006 -
Aed8g1355 917 PANTHER VILLIN-3-LIKE ISOFORM X1 18 917 - -
Aed8g1355 917 SUPERFAMILY Actin depolymerizing proteins 94 202 - -
Aed8g1355 917 MobiDBLite consensus disorder prediction 757 858 - -
Aed8g1355 917 MobiDBLite consensus disorder prediction 719 736 - -
Aed8g1355 917 Pfam Villin headpiece domain 882 917 IPR003128 GO:0003779|GO:0007010
Aed8g1355 917 MobiDBLite consensus disorder prediction 819 858 - -
Aed8g1355 917 Gene3D Severin 14 96 IPR029006 -
Aed8g1355 917 PRINTS Gelsolin family signature 498 518 IPR007122 GO:0051015
Aed8g1355 917 PRINTS Gelsolin family signature 592 614 IPR007122 GO:0051015
Aed8g1355 917 PRINTS Gelsolin family signature 376 392 IPR007122 GO:0051015
Aed8g1355 917 PRINTS Gelsolin family signature 402 420 IPR007122 GO:0051015
Aed8g1355 917 PRINTS Gelsolin family signature 621 640 IPR007122 GO:0051015
Aed8g1355 917 PRINTS Gelsolin family signature 288 309 IPR007122 GO:0051015
Aed8g1355 917 PRINTS Gelsolin family signature 435 455 IPR007122 GO:0051015
Aed8g1355 917 CDD gelsolin_S4_like 351 452 - -
Aed8g1355 917 SUPERFAMILY Actin depolymerizing proteins 348 493 - -
Aed8g1355 917 CDD gelsolin_S6_like 576 667 - -
Aed8g1355 917 Gene3D Villin headpiece domain 841 917 IPR036886 GO:0003779|GO:0007010
Aed8g1355 917 SUPERFAMILY Actin depolymerizing proteins 20 113 - -
Aed8g1355 917 SUPERFAMILY Actin depolymerizing proteins 475 577 - -
Aed8g1355 917 CDD gelsolin_S3_like 219 308 - -
Aed8g1355 917 Gene3D Severin 97 207 IPR029006 -
Aed8g1355 917 SUPERFAMILY VHP, Villin headpiece domain 852 917 IPR036886 GO:0003779|GO:0007010
Aed8g1355 917 SMART VHP_1 882 917 IPR003128 GO:0003779|GO:0007010
Aed8g1355 917 CDD gelsolin_S5_like 484 574 - -
Aed8g1355 917 Gene3D Severin 354 484 IPR029006 -
Aed8g1355 917 Gene3D Severin 575 680 IPR029006 -
Aed8g1355 917 Gene3D Severin 214 324 IPR029006 -
Aed8g1355 917 MobiDBLite consensus disorder prediction 801 818 - -
Aed8g1355 917 SUPERFAMILY Actin depolymerizing proteins 188 311 - -
Aed8g1355 917 SUPERFAMILY Actin depolymerizing proteins 561 665 - -
Aed8g1355 917 ProSiteProfiles Headpiece (HP) domain profile. 852 917 IPR003128 GO:0003779|GO:0007010
Aed8g1355 917 MobiDBLite consensus disorder prediction 719 743 - -
Aed8g1355 917 SMART VILL_6 357 455 IPR007122 GO:0051015
Aed8g1355 917 SMART VILL_6 216 309 IPR007122 GO:0051015
Aed8g1355 917 SMART VILL_6 573 666 IPR007122 GO:0051015
Aed8g1355 917 SMART VILL_6 102 199 IPR007122 GO:0051015
Aed8g1355 917 SMART VILL_6 483 572 IPR007122 GO:0051015
Aed8g1355 917 SMART VILL_6 14 82 IPR007122 GO:0051015
Aed8g1355 917 CDD gelsolin_S2_like 103 197 - -
Aed8g1355 917 PANTHER VILLIN 18 917 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1355 Aed-Chr8 17550699 17571514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1355 - - gmx:100788765 1620.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1355 8 17550699 17571514 Aed8g1355 8 17550699 17571514 ECH
Aed4g0451 4 3319615 3331886 Aed8g1355 8 17550699 17571514 PCT