Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0451 ATGTCTAGTGCTACAAAAGTGTTGGAACCAGCATTCCAGGGAGTTGGTCAAAAAGTAGGGACTGAAATATGGAGGATTGAGAATTTTCTGCCAGTTCCATTGCCCAGATCTGAATATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGTGCTTATTTGTATGATATTCACTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACAGCAGCCATTAAAACTGTTGAACTCGATGCGTCTCTAGGAGGACGTGCAGTGCAATACAGGGAAATTCAAGGGCATGAATCTGACAAGTTTTTGTCATACTTTAAGCCATGTATAATACCATTAGAGGGGGGCATCGCATCTGGATTTAGAAAATCTGAAGAAGAGGAGTTTGAAACACGTTTGTATGTATGCAAAGGCAAAAGAGTTGTCCCTTTTGCACGGTCTTCACTGAATCATGATGATGTATTCATCCTAGACACTCAGGATAAGATTTATCAATTCAATGGTGCAAACTCCAATATCCAGGAAAGAGCCAAGGCTCTGGAAGTTATTCAGTTGTTGAAGGAAAAGTATCACGAGGGAAAATGCGATGTTGCAATTGTTGATGATGGCAAGCTGGATACTGAGTCAGACTCGGGAGAATTTTGGGTTCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATCAGTGAGGATGATATTGTTCCAGAGGCCATTCCTGCTCAACTCTATAGTATTGCTGATGGTGAGGTCAAGCCTGTGGAAGGTGAACTTTCAAAATCACTTCTGGAGAACTACAAATGCTATCTATTGGACTGTGGTTCTGAGGTATTCATCTGGGTTGGCCGGGTAACACAAATTGAAGAACGAAAAGCAGCATGCCAAGCGGCAGAGGAGTTTGTCACAAGTCAAAAAAGGCCGAAATCTACAAGGATTACCAGAATTATTCAAGGTTATGAGACACATTCATTCAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTACTACCAGTGCTGATGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAGCAAGGTATGGGTGTGAAAGGGGTGACAAAAACTACACCAGTTGTTGAGGAAATTCCACCTCTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGCAAATCAATGGAAGTGCTAAGACTCCATTACCTAAGGAGGACATTGGTAAATTTTATAGTGGAGATTGTTACATAGTACTGTACACTTATCACTCTAGCGAGAGGAAGGAAGACTACTACTTGTGTTGCTGGTTTGGAAAAGACAGCATTGAGGAGGACCAAAGGATGGCTATTCGATTGGCTAACACAATGTTCAACTCATTAAAGGGTAGACCTGTTCAGGGTCACATATTTGATGGTAAAGAGCCACCACAGTTTATTGCTCTTTTCCATCCAATGGTGGTCCTCAAGGGAGGCTTGAGCTCTGGTTACAAAAAATTTATAGCAGATAAAGGTTTGCCAGATGAGACATACACAGCAGAGAGTGTTGCACTTATTCGAATTTCTGGAACATCCATTCATAATAATAAAGTGGTGCAAGTAGATGCAGTGGCAGCGTCGCTGAATTCTACCGAGTGTTTTATCCTGCAGTCTGGCTCAGCTGTTTTTACATGGCATGGGATTCAATGTTCCCTTGAGCAGCAGCAGCTTGCAGCAAAAGTTGCTGAATTTTTAAGGCCAGGAGTTGCTTTAAAGCTTGCTAAAGAAGGAACAGAAACCTCAACTTTCTGGTTTTCACTTGGAGGGAAACAAAGTTACACCAGCAAAAAAGTCACTAATGACATTATCAGAGACCCACATTTGTTTACTTTCTCTTTTAATAGAGGAAAGTTACAGGTAGAGGAGGTTTACAACTTCTCCCAAGATGATTTGTTAACAGAGGATATCCTGATCCTTGACACGCACGCAGAAGTGTTTGTTTGGATTGGTCAGTGCGTGGACCCAAAAGAAAAGCAAAATGCTTTTGATTTTGCCCAGAAATACATAGATAAGGCTGCATCTCTAGATGGACTATCTCCTCATGTACCACTATACAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCTTGGGATCATGCAAAAGCTATGTCAATGAACTTCAAATCAATAGCAGATTCTCCTGATAAGAAAAGAGGGCATAGGGATAAGTTGAATGGGTTAAGTCGAGGAGGACCAAGACAAAGGGCTGAAGCCTTAGCAGCCTTAAACTCTGCATTTAATTCATCATCTGGAGCCAAAATTTATACTCCTCGTCCATCTGGAAGAAGTCAAGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTCTCTTCAGTTCTTACTGCTGAAAAGAAGAAATCTTCACCTGAAACTTCTCCTGTGGCAAGCACTAGTCCTGTAGTGGAAAGTAGCAACTTTGATACTAAAAGTGAAAGTGCCCCTTCCGAAATGGAAGTTGTTGAAGAAGTTGCAGAAGTCAAGGAGACAGAAGAAGTTGTTGCCCCTGAAATTGGTACCAATGGGGATTCAGAACCACCAAAACAAGAAAATGTGGAGGATGGAGGAAATGGCAGTGAAAATAATAATCAAAATGTCTTTAGTTATGAGCAATTAAATACTAAATCTGGTAGTGTTGTGTCTGGAATTGATCTTAAAAGGAGAGAGGCCTATCTGTCAGACAAAGACTTTGGAACTGTATTTGGAATGACCAAAGACGTATTCTCTAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAGGAAAGTGGATTTGTTCTAG 2826 0.4154 MSSATKVLEPAFQGVGQKVGTEIWRIENFLPVPLPRSEYGKFYMGDSYIILQTTQGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDASLGGRAVQYREIQGHESDKFLSYFKPCIIPLEGGIASGFRKSEEEEFETRLYVCKGKRVVPFARSSLNHDDVFILDTQDKIYQFNGANSNIQERAKALEVIQLLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIVPEAIPAQLYSIADGEVKPVEGELSKSLLENYKCYLLDCGSEVFIWVGRVTQIEERKAACQAAEEFVTSQKRPKSTRITRIIQGYETHSFKSNFDSWPSGSATTSADEGRGKVAALLKQQGMGVKGVTKTTPVVEEIPPLLEGGGKMEVWQINGSAKTPLPKEDIGKFYSGDCYIVLYTYHSSERKEDYYLCCWFGKDSIEEDQRMAIRLANTMFNSLKGRPVQGHIFDGKEPPQFIALFHPMVVLKGGLSSGYKKFIADKGLPDETYTAESVALIRISGTSIHNNKVVQVDAVAASLNSTECFILQSGSAVFTWHGIQCSLEQQQLAAKVAEFLRPGVALKLAKEGTETSTFWFSLGGKQSYTSKKVTNDIIRDPHLFTFSFNRGKLQVEEVYNFSQDDLLTEDILILDTHAEVFVWIGQCVDPKEKQNAFDFAQKYIDKAASLDGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKAMSMNFKSIADSPDKKRGHRDKLNGLSRGGPRQRAEALAALNSAFNSSSGAKIYTPRPSGRSQGSQRAAAVAALSSVLTAEKKKSSPETSPVASTSPVVESSNFDTKSESAPSEMEVVEEVAEVKETEEVVAPEIGTNGDSEPPKQENVEDGGNGSENNNQNVFSYEQLNTKSGSVVSGIDLKRREAYLSDKDFGTVFGMTKDVFSKLPRWKQDMLKRKVDLF 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0451 941 Gene3D Villin headpiece domain 866 941 IPR036886 GO:0003779|GO:0007010
Aed4g0451 941 SUPERFAMILY Actin depolymerizing proteins 377 523 - -
Aed4g0451 941 PANTHER VILLIN 1 726 IPR007122 GO:0051015
Aed4g0451 941 PANTHER VILLIN-3-LIKE ISOFORM X1 773 941 - -
Aed4g0451 941 MobiDBLite consensus disorder prediction 798 828 - -
Aed4g0451 941 Gene3D Severin 133 241 IPR029006 -
Aed4g0451 941 Gene3D Severin 383 516 IPR029006 -
Aed4g0451 941 CDD gelsolin_S4_like 381 482 - -
Aed4g0451 941 SMART VILL_6 139 229 IPR007122 GO:0051015
Aed4g0451 941 SMART VILL_6 246 339 IPR007122 GO:0051015
Aed4g0451 941 SMART VILL_6 513 602 IPR007122 GO:0051015
Aed4g0451 941 SMART VILL_6 387 485 IPR007122 GO:0051015
Aed4g0451 941 SMART VILL_6 19 117 IPR007122 GO:0051015
Aed4g0451 941 SMART VILL_6 619 714 IPR007122 GO:0051015
Aed4g0451 941 PANTHER VILLIN 773 941 IPR007122 GO:0051015
Aed4g0451 941 Pfam Villin headpiece domain 906 941 IPR003128 GO:0003779|GO:0007010
Aed4g0451 941 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Aed4g0451 941 Gene3D Severin 242 353 IPR029006 -
Aed4g0451 941 SUPERFAMILY Actin depolymerizing proteins 218 340 - -
Aed4g0451 941 MobiDBLite consensus disorder prediction 798 879 - -
Aed4g0451 941 Gene3D Severin 609 729 IPR029006 -
Aed4g0451 941 CDD gelsolin_S6_like 617 715 - -
Aed4g0451 941 PRINTS Gelsolin family signature 406 422 IPR007122 GO:0051015
Aed4g0451 941 PRINTS Gelsolin family signature 528 548 IPR007122 GO:0051015
Aed4g0451 941 PRINTS Gelsolin family signature 640 662 IPR007122 GO:0051015
Aed4g0451 941 PRINTS Gelsolin family signature 588 607 IPR007122 GO:0051015
Aed4g0451 941 PRINTS Gelsolin family signature 669 688 IPR007122 GO:0051015
Aed4g0451 941 PRINTS Gelsolin family signature 432 450 IPR007122 GO:0051015
Aed4g0451 941 PRINTS Gelsolin family signature 465 485 IPR007122 GO:0051015
Aed4g0451 941 PRINTS Gelsolin family signature 318 339 IPR007122 GO:0051015
Aed4g0451 941 Gene3D Severin 6 132 IPR029006 -
Aed4g0451 941 MobiDBLite consensus disorder prediction 830 848 - -
Aed4g0451 941 CDD gelsolin_S5_like 514 604 - -
Aed4g0451 941 Pfam Gelsolin repeat 527 578 IPR007123 -
Aed4g0451 941 Pfam Gelsolin repeat 149 212 IPR007123 -
Aed4g0451 941 Pfam Gelsolin repeat 633 708 IPR007123 -
Aed4g0451 941 Pfam Gelsolin repeat 400 479 IPR007123 -
Aed4g0451 941 Pfam Gelsolin repeat 259 332 IPR007123 -
Aed4g0451 941 Pfam Gelsolin repeat 31 111 IPR007123 -
Aed4g0451 941 Gene3D Severin 517 608 IPR029006 -
Aed4g0451 941 MobiDBLite consensus disorder prediction 767 786 - -
Aed4g0451 941 CDD gelsolin_S1_like 12 124 - -
Aed4g0451 941 CDD gelsolin_S3_like 249 338 - -
Aed4g0451 941 SMART VHP_1 906 941 IPR003128 GO:0003779|GO:0007010
Aed4g0451 941 PANTHER VILLIN-3-LIKE ISOFORM X1 1 726 - -
Aed4g0451 941 MobiDBLite consensus disorder prediction 728 745 - -
Aed4g0451 941 CDD gelsolin_S2_like 138 227 - -
Aed4g0451 941 SUPERFAMILY Actin depolymerizing proteins 505 610 - -
Aed4g0451 941 ProSiteProfiles Headpiece (HP) domain profile. 876 941 IPR003128 GO:0003779|GO:0007010
Aed4g0451 941 MobiDBLite consensus disorder prediction 727 751 - -
Aed4g0451 941 SUPERFAMILY Actin depolymerizing proteins 591 713 - -
Aed4g0451 941 SUPERFAMILY Actin depolymerizing proteins 129 232 - -
Aed4g0451 941 SUPERFAMILY VHP, Villin headpiece domain 874 941 IPR036886 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0451 Aed-Chr4 3319615 3331886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0451 - - gmx:100787208 1632.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0451 4 3319615 3331886 Aed8g1355 8 17550699 17571514 PCT