Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0939 ATGGCCACGCACGTGAGTCACGTGACAGTAGCAGCAGCATCATTTCTACTGCTTCTTCTTCTTCCCCCTTTCTCTTTCTCCATCTCCCATTCTCACCGATCCGCTGCCATCAACCTCTTCGCTTCCACTCCCGCAAGCTTAGAAGACGCGTACGAAGCGCTTAGAGTTTTTCAGATTCTCGGAATCGAAGAGGAGGAGAAGAAGGCTTCTGTGAGTGCGGACACGTGTCAGAATGTGTTGCGAAATCTAGCCTCGTCTTCCCCTCTCAAGGATTTGTTCTATGCCTTGAAAGTTAACGCCATTCTAAAATGCAATGTTAATGGGAAGGTTTTCAAGGATATTGCTTCAAGGCTTAAAGCCACTGTTCATGATGCGAGTGCTTTGCTTGACATATACTACTCAATTGGAGGTTTGGTTCTTATCATGGATCAGGATTCTAATGCTGATGTGCTTCTTGCTGATGTTGATGGGGTTTTTCAATCAATCAAGGCTCTCAGTCAAAGTGACGGAAGATGGCGCTATAGTTCTGATAATCCAGAGTCCAGTACCTATGCTGCTGCTCCATATTGGCAGGTCAACGTAGTGAAAAATGACATAGTAAAGCTTTTTGATGGCATTGAGAAATATGATGATGGGACCTTTTATTTTGATGAGAAATTTGTTGGTGGACATGAGGAACAGGGTTCTCTTTCCACAACTTCTTCAGTTGTTAGAGGGGTTACTGCATTTGCTGCTATAACATCTGAAAATATACATCTTCCAGGGGATAAAATATTGGGCTTGGCAAAATTTTTCTTGGGCATTGGAATTCCAGGAGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTAGCTTTTCTAGAGAGCAATAGGCAAGTTAAGGTGAATACAGTGCTTGGTTCAGCTGCACCACCTTTAACAGTTAAGGTTGTCTGGGCATTTAGCACTGGTGCAAAAGATTCAGCTATTATTGATAGCAAGGAGCTCCGGTATGACCAAGAAAGTGGATTTCATGTCTTGGATGCTTTCCCAAAGAATGTGGATGTGGGGACATATGTGTTTGTTTTTGAGATTGTGCTTCATGATTCTGGCAGTGAAAAAGTTTATGCAACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGAATTATTGAAGTTGGCAATGCAGAAATCACAGTTCTGGACAGTGATCTTGGAAGTGTTGAAACCTTGAAAAAGTATGTTTCTATTTTTCTATTTCTGATTAGTATGTCCAATGATTGTCATTGTATCATGTGTTTGAAGTCTGGATTGTTGCATGTGAATTCATATCTCTTCTGCCTTTCTACTAGTAACTCCTGTATGGCATTTTTCAAGTTGAGGCATGAGACAAAGGTTGAACACATCTTTGTGGTTGGAAATACTGACAAGAAGTTTGAGATAATTCTCGATTTTCTTGGCTTGGTGGAGAAACTTTTTTATCTCTCAGGCAAATATGAAATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACAACTACTTGGCCATGTCGAATTAAATCTTCCAGAAGCACCTGAGAAAGCAGCCCGCCCTTCACAACCACCCATTGACCCTTACTCAAGATATGGGTCTAAAGCAGAGATTGCCCATATATTCAGGGTTCCTGAAAAGAGACCACCCCAAGAACTCTCTCTTGCTTTCTTGGGTTTGATCTTTTTGCCATTCATTGGCTTTTTGATTGGGTTATTGCGTCTGGGGGTGAACCTAAAGAATTACCCTAGTTCAACAACACCTGCTACATTTGCAACTCTTTTCCATGTTGGTATTGCTGCAGTTTTGTTACTTTATGTACTTTTTTGGTTAAAGCTGGACCTGTTTATTACACTAAAAGCATTTGGTCTTTTGGGAGCTTTTCTGATGTTTGTGGGGCACAAAATTCTTTCTCATCTTGCTTTTACATCCCCCAAGTTGAAATCTGCATGA 1977 0.4117 MATHVSHVTVAAASFLLLLLLPPFSFSISHSHRSAAINLFASTPASLEDAYEALRVFQILGIEEEEKKASVSADTCQNVLRNLASSSPLKDLFYALKVNAILKCNVNGKVFKDIASRLKATVHDASALLDIYYSIGGLVLIMDQDSNADVLLADVDGVFQSIKALSQSDGRWRYSSDNPESSTYAAAPYWQVNVVKNDIVKLFDGIEKYDDGTFYFDEKFVGGHEEQGSLSTTSSVVRGVTAFAAITSENIHLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLAFLESNRQVKVNTVLGSAAPPLTVKVVWAFSTGAKDSAIIDSKELRYDQESGFHVLDAFPKNVDVGTYVFVFEIVLHDSGSEKVYATGGQIHVPIYVTGIIEVGNAEITVLDSDLGSVETLKKYVSIFLFLISMSNDCHCIMCLKSGLLHVNSYLFCLSTSNSCMAFFKLRHETKVEHIFVVGNTDKKFEIILDFLGLVEKLFYLSGKYEIELTVGDAVMENSFLQLLGHVELNLPEAPEKAARPSQPPIDPYSRYGSKAEIAHIFRVPEKRPPQELSLAFLGLIFLPFIGFLIGLLRLGVNLKNYPSSTTPATFATLFHVGIAAVLLLYVLFWLKLDLFITLKAFGLLGAFLMFVGHKILSHLAFTSPKLKSA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0939 658 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 292 658 - -
Aed8g0939 658 Pfam Oligosaccharyltransferase subunit Ribophorin II 16 649 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aed8g0939 658 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 27 291 - -
Aed8g0939 658 PANTHER RIBOPHORIN II 27 291 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aed8g0939 658 PANTHER RIBOPHORIN II 292 658 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0939 Aed-Chr8 8165620 8174794 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0939 K12667 - gmx:100814831 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0939 8 8165620 8174794 Aed8g0939 8 8165620 8174794 ECH
Aed4g0159 4 1153308 1163235 Aed8g0939 8 8165620 8174794 PCT