Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0159 ATGGCCAGAAACCTAGCAGGACTGCTGGCGCTACTTTTCGCTGCTTCGATCTGCGGCGCCTTCACGATTCCCGGCCCCGTCTCCGATGCTCACCGTTCCGCCGCGTCAGAGCTCTTCGATGGATCATTTTCAAGTTTAGAAGAGGCCTATGAGGGCCTAAGAGTTTTTGAGATTCTTGCAATTGGGGATAAGCCTGATGTAAGCACAACCACTTGCAACAAAGTTGTGGAAAACCTTGGGTCGTCATCCCCTGTGAAGGATTTGTTTTATGCGTTAAAGGTTAATGGAATATTAAAATGCAAGGTTAATGGGGACGTTTTCAAGGATATTGCTTTGAGACTTAAAGCCACTGTCAATGACGCGAGTACTTTGGTTGACATGTACTATTCAATAGGAAGTTTGGACCAGGCTTCTGATGTTGATGTGCTTCTTACTGATGCTGATGGGACCTTCCATTCAATCAAGGCTCTGAGCCAAAGCGATGGAAGATGGCGTTATAGTTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCACTGGCTGGAGTGATCTCATTAGCATCTTCTGAAATTGATCTGTCTAGGGTGAATACAGTGAAAAATGATATATTGAAGCTTTTTGACAGCATTGAGAAATATGAGGATGGAACCTTCTATTTTGATGAGAAATTTGTTGGTGGACGTGAGCATCAGGGTTCTCTTGCCACAACTTCTTCTGTTGTTCGAGGGGTTACAGCATTTGCTGCTGCAACTTCTGGAAAAATAAATCTTCCGGGGGATAAAATATTGGGTTTAGCAAAATTTTTCCTGGGAATTGGGATCCCAGGAGATGCCAAGGACTTCTTCAATCAAGTTGAATCATTAGCTCTTTTAGAGAACAACAGGCAAGGTTTCCATCCCATTGCTACTGTCACTTCCTGCAACAGTTTATTCATTATCCAAAAAAGATCAGCTCAAGTTTTTCTGGTTCTCACTTACACTTGGGAAAACATGACAAATTTCTATTTCAAAATGAATCAGGTTAGGGTGAACACTGTACTTGGTTCAGCTGCACCACCTTTAACAGTTAAGCTTGTCCGAGCTTTCCGCCCTGATGCTAAAGATTCAGCTATTATTGAGAGCAAGGAGCTCCAATATGATCAAAATAATGGAATTCATGTCTTGGAAGTTTTCCCAGATAATGTGGATGTGGGAACTTATGTGTTTGTTTTTGAGATTGTACTTCACGATTCTGCTGGTGAAAAAGTTTATGCTACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGCATTATTAAAGTCAGCAATGCAGAAATTGTAGTTCTTGACAGTGATCTTGGAAGCGTTGAAACCCAGAAAACGCTAGATTTGGCTGGAAATGATGTTGTTTCACTCTCAGCTAACCACTTGCAAAAGTTGCGCTTTTCTTTCCAATTGACAACACCTAATGGTCATGCTTTTAAGCCTCATCAGGCATTTTTCAAGTTGAAGCATGAGACAAAGCATGAACACATCTTTGTGGTTGGAAATACTGGCAAGAAGTTTGAGATTATTCTTGATTTTCTTGGTTTGGTGGAGAAATTTTATTACCTCTCAGGCCGATATGACATTGAGCTTACTGTTGGGGATGCTGTCATGGAGAACTCTTTCTTACGGCTGCTTGGTCATGTTGATTTAGATCTTCCAGAAGCACCTGAGAAGGCAGCCCGTCTTCCTCCACTCCCTGTTGATCCTTACGCAAGATATGGGCCCAAAGCTGAGATAGCCCACTTATTCAGGGCTCCTGAAAAGCGACCACCCCAGGAACTCTCTCTTATTTTCTTGGGTTTGACCCTTCTGCCATTTATTGGCTTTTTGGTTGGGCTGTTACGCCTGGGAGTGAACTTGAAGAGTTTTCCTTCTTCAGCAGTACCTGCTACATATGCCATCTTATTCCAGCTTGGCATTGCTGCAGTTCTATTGCTTTATGCACTTTTCTGGTTGAAGCTGGACTTGTTCACTACACTCAAAACTGTAGGATTTTTGGGAGCTTTTCTGCTGTTTGTGGGACACAGAATTCTTTCCCATCTCGCTTCAACATCATCCAAGTTGAAGTCTGCATGA 2121 0.4257 MARNLAGLLALLFAASICGAFTIPGPVSDAHRSAASELFDGSFSSLEEAYEGLRVFEILAIGDKPDVSTTTCNKVVENLGSSSPVKDLFYALKVNGILKCKVNGDVFKDIALRLKATVNDASTLVDMYYSIGSLDQASDVDVLLTDADGTFHSIKALSQSDGRWRYSSDNPESSTYAAGLALEALAGVISLASSEIDLSRVNTVKNDILKLFDSIEKYEDGTFYFDEKFVGGREHQGSLATTSSVVRGVTAFAAATSGKINLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLALLENNRQGFHPIATVTSCNSLFIIQKRSAQVFLVLTYTWENMTNFYFKMNQVRVNTVLGSAAPPLTVKLVRAFRPDAKDSAIIESKELQYDQNNGIHVLEVFPDNVDVGTYVFVFEIVLHDSAGEKVYATGGQIHVPIYVTGIIKVSNAEIVVLDSDLGSVETQKTLDLAGNDVVSLSANHLQKLRFSFQLTTPNGHAFKPHQAFFKLKHETKHEHIFVVGNTGKKFEIILDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRLLGHVDLDLPEAPEKAARLPPLPVDPYARYGPKAEIAHLFRAPEKRPPQELSLIFLGLTLLPFIGFLVGLLRLGVNLKSFPSSAVPATYAILFQLGIAAVLLLYALFWLKLDLFTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0159 706 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 2 706 - -
Aed4g0159 706 PANTHER RIBOPHORIN II 2 706 IPR008814 GO:0006487|GO:0008250|GO:0016021
Aed4g0159 706 Pfam Oligosaccharyltransferase subunit Ribophorin II 8 698 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0159 Aed-Chr4 1153308 1163235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0159 K12667 - gmx:100780415 1181.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0159 4 1153308 1163235 Aed4g0159 4 1153308 1163235 ECH
Aed4g0159 4 1153308 1163235 Aed8g0939 8 8165620 8174794 PCT