Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0848 ATGGAACCCAACCTCACAATGAAGTGCAGCGGAAACGAGTTGCTTCAAACAAATGGCACTTATTTGCCAGAGAGTCCTCGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTGCTCTCGAGGTCTCTAAAGCTCTTGCACTTCTTCCACCACAACCACCTTCTTCTTCTTCTTCTTCTTCTAAGCCTTGTGTTGCTGTGACTAACAACAACACTAACTCCATTATTTCCGAAGAAACTACTTCAGAGGATTTCTCAGCCATGATGATGTGTGGCAACCAGTTCTCTTTTGCTTCCTCTGCCACTTCACAGCTTGTCCTTGACCGCATCATGTCACACTCTGCAAGAGAGGAAGTGTCTCCAACATTGACGTCAGGTAGACTGTCTCATAGTAGTGAGCCATTGAACGGAACGGATAGTTCACCAATCTCTCCTTCTGACGAGTTTGACGATGTTGTCAAGTGTGTGGAGGCTGCTGAAGCAATGGGAGCTGATAGAGATCACCTTGCTTCTGTGGTTAGCTCTGCTGTCAATGGATTGGAATATGTGGTGGTAAAGGCAATAACAGTAATTCTAGCACCAGTGATAGTGGAGAGATTATCAATGGTGAAAATTTTTTGGGTGCCTGCAGCCAAGAACTCCTTGCTAGGGGCACTGCATTACTCAAACGGACCCGTAAAGGTGATGCTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGTTGGATGTGTGCACAAATTTACCAGCATGGCCAGGGAGGCATCTGTTTGATGGCGGCGAAGAAAAAAGGTATTTTGGATTGAAGACAGAAGCAAGAGGGATTGTGGAGTTCGAATGTAGAAATAAAAGAGAATATGATATCTGGACCCAAGGGGTTTCTAGACTTCTTTCCATTGTTGCACGCAAACAAAACAAAACCTAA 954 0.4444 MEPNLTMKCSGNELLQTNGTYLPESPRVPMEFLSRSWSASALEVSKALALLPPQPPSSSSSSSKPCVAVTNNNTNSIISEETTSEDFSAMMMCGNQFSFASSATSQLVLDRIMSHSAREEVSPTLTSGRLSHSSEPLNGTDSSPISPSDEFDDVVKCVEAAEAMGADRDHLASVVSSAVNGLEYVVVKAITVILAPVIVERLSMVKIFWVPAAKNSLLGALHYSNGPVKVMLKMKSRHVAGTITKKKKNVVLDVCTNLPAWPGRHLFDGGEEKRYFGLKTEARGIVEFECRNKREYDIWTQGVSRLLSIVARKQNKT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0848 317 Pfam Auxin canalisation 23 154 IPR008546 -
Aed8g0848 317 Pfam Auxin canalisation 156 181 IPR008546 -
Aed8g0848 317 Pfam Plant pleckstrin homology-like region 223 310 IPR013666 -
Aed8g0848 317 PANTHER EXPRESSED PROTEIN 156 181 IPR040269 -
Aed8g0848 317 PANTHER EXPRESSED PROTEIN 229 316 IPR040269 -
Aed8g0848 317 PANTHER EXPRESSED PROTEIN 1 156 IPR040269 -
Aed8g0848 317 MobiDBLite consensus disorder prediction 119 148 - -
Aed8g0848 317 MobiDBLite consensus disorder prediction 119 147 - -
Aed8g0848 317 PANTHER AUXIN CANALIZATION PROTEIN 1 156 - -
Aed8g0848 317 PANTHER AUXIN CANALIZATION PROTEIN 156 181 - -
Aed8g0848 317 PANTHER AUXIN CANALIZATION PROTEIN 229 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0848 Aed-Chr8 7180860 7184587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0848 - - gmx:100782024 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0238 4 1709013 1712448 Aed8g0848 8 7180860 7184587 PCT