Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0238 ATGGAGCCAAAGTGCAGCACCATAAACTGTCGGCGGCCGGAGTTTGTTCCGACCCCTCTGCCGGAGAGTCCTCGAGTGCCGATGGAGTTTCTCTCACGCTCATGGAGTGCCTCTGCTCTTGAAGTCTCAAAAGCTCTTGCATCTCACTCTTCTTACACGCCCAATAATTCCAACAACAACACTTCCATTATTCCTGAAGAAATTGCTGCGTCTTCTAACAACAACAACTCTTTCTCTGAGGACTTCTCAAGCATGTCGTCTAAGAATCAGTTCTCTTTTGCTTCCTCTGCTACATCCCAGCTCGTACTTGAACGCATTATGTCGCAGTCCACAAGAGAGGAAGTGTCTCCATTAACTTCTGGAAGATTATCTCACAGCAGCGAGCCTTTGAATGGTGGTGGTTCCTTAACCGGAACAGATAGCCCTCCCATTTCACCTTCAGATGAATTTGACGACGTTGTTAAGTTTTTTCGGGCAAACAATTCCATTCACCCTTTATTCAATGGTGGAAGAGCCAGTGCAACTATTGGCAATGGCACTGCTTGCTCAGGACCTAAAACTGTTGGAAGATGGTTGAAGGACCGAAGAGAAAAGAAGAAAGAAGAGAACAGAACCCACATTGCTCAGCTGCATGCCACTATATCAGTGGCTGCAGTGGCTGCTGCTGTAGCAGCCATTGCTGCTGCAACAGCAGGCTCATCTGCACCCACCAAGGATGAGAAGATGGCCAAGACTGACATGGCTGTTGCTTCTGCAGCAACATTAGTTGCTGCACAGTGTGTTGAGGCTGCCGAAGCAATGGGTGCTGAACGTGACCACCTTGCTTCAGTGGTTAGCTCTGCTGTGAATGTCCGTTCTCATGATGATATCACTACTCTCACTGCTGCAGCTGCCACAGCTCTACGGGGAGCAGCAACTTTAAAAGCAAGAGCTTTGAAAGAGGTATGGAATATTGCTACAGTGACACCACTAGAGAGAGGTATAGGTGGGATTGGACTCTGTGGTAAAAGTATTAACAGTAATACAAGCAATACCAGCACTAGTGATAGTGGGGAAGTTTTCAATGGAGAGAATTTTCTAGGTTCCTGCAGCCAAGAGGTACTTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGGCGATCTTCACTGGAAAATAGTGTCGGTTTATATACATCGAACAGGCCAGGTAATGCTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAACAAGAATGTTGTGTTAGATATATGCACAGATTTAGCAGCATGGCCAGGAAGACATCTTCTTGATGATGGTGAAAAGCGACGGTACTTTGGATTGAAGACAGACTCAAGGGGGATTGTGGAGTTTGAGTGTCGAAATCAAAGAGAATATGATATTTGGACACAAGGGGTCTCAAGGCTTCTCTCCGTTGTTGCACAAAGACAAAATAGATATGGAAATTGA 1464 0.4604 MEPKCSTINCRRPEFVPTPLPESPRVPMEFLSRSWSASALEVSKALASHSSYTPNNSNNNTSIIPEEIAASSNNNNSFSEDFSSMSSKNQFSFASSATSQLVLERIMSQSTREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASATIGNGTACSGPKTVGRWLKDRREKKKEENRTHIAQLHATISVAAVAAAVAAIAAATAGSSAPTKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIATVTPLERGIGGIGLCGKSINSNTSNTSTSDSGEVFNGENFLGSCSQEVLAKGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKNKNVVLDICTDLAAWPGRHLLDDGEKRRYFGLKTDSRGIVEFECRNQREYDIWTQGVSRLLSVVAQRQNRYGN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0238 487 MobiDBLite consensus disorder prediction 111 144 - -
Aed4g0238 487 MobiDBLite consensus disorder prediction 111 148 - -
Aed4g0238 487 Pfam Auxin canalisation 21 326 IPR008546 -
Aed4g0238 487 Pfam Plant pleckstrin homology-like region 373 478 IPR013666 -
Aed4g0238 487 PANTHER AUXIN CANALIZATION PROTEIN 2 487 - -
Aed4g0238 487 PANTHER EXPRESSED PROTEIN 2 487 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0238 Aed-Chr4 1709013 1712448 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0238 - - gmx:100805743 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0238 4 1709013 1712448 Aed4g0238 4 1709013 1712448 ECH
Aed4g0238 4 1709013 1712448 Aed8g0848 8 7180860 7184587 PCT