Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0835 ATGTCCCATCTGCGCTTTCTTTCTTTCCTTGGATTTTCATACTCTCCAAAACACGACCATGTGAAAAACAGAGGAGTGCCCTGCCCCTCCCACTTTGTTGTGTTCCTATCTTCTCTTCTCCCAGTTTCCAAGCTTTATGAAGTTGTCCTAACAATGAGAGATGAGAACTCGAAGAAAAGCAAGCTTTCATGGCCCAAAACGTTGGTCAAGAAGTGGTTCAATATTAAGAGCAAAAACGAGGACTTTCAGGCAGATGATGTCCTCCACGCAGGTGTCAATGGAGAGTGGAGGAGCAACTATTCACAGAGGGAGGAATACACTATAAAGAAAAGCAAGCCAGAGAGAGCAAAGAAGAGGCACTCAGATAGAATGCGGCGAGGTAAAATTGACCTTGATGCAGCTCCGGTTACAGATAACTATAGAATCTTTGCTGCCACTTGGAATGTAGCTGGAAAATCTCCTCCAAGTTATTTGAGTCTGGAAGATTGGCTTCACTCTTCTCCTCCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTGCCTCTCAATGCTGGTAATGTTTTGGGAACAGAAGACAATGGCCCTGCAAGAAAGTGGCTAGCTCTTATTAGGAAGACCCTAAACAGTCTTCCCGGAACAAGTGGCGAATGCCACACTACTTCGCCGCTTCCTGATCCTATTGTAGAGCTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGGCGACGTCTTTCTTCCACCGCCGCTCATTCCAATCCTTGAGCCATAGTATGAGAGTTGACAATGACATGTCACTACCACAAGCAGCATGCCTTGATCGCCGTCTCAGCGTCTGTGATAGAATGATGTTCGGCCACCGGACAAGTGACTATGACCCGAGTTATAGATGGTGTTCATCGGACGATGAAAACGGCCCTGGTGATTCCCCGGTGGCAACACATTATTCACCAATGACATATAGAGGTTGTTTCTCTATGGAGGATAGAGATAGACAGACAGGGCAGTCAAGATATTGTTTGGTTGCTAGTAAGCAGATGGTTGGGATATTTCTAACAGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAACATGAAGGTGTCTTGTGTTGGCAGAGGATTAATGGGATATCTTGGAAACAAGGGTTCAATATCAATTAGCATGTCATTGCACCAAACAAGCTTTTGCTTCGTCTGTAGTCATTTGACTTCTGGACAAAAGGAAGGTGATGAGCTAAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCGGGTTCACGGCATCGGTGATGACAGTTCTCCACAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTGAATTATCGGATAGCCCTTTCGTACCGTGCTGCAAAAGCTCTTGTTGAGATGCATAATTGGAAGCTACATATAGAGCAGAGACAAGGTCGAGTCTTTGAAGGATGGAATGAGGGGAGAATATATTTCCCTCCCACATACAAGTATTCAAACAACTCAGATAGATATGCAGGCGATGAAAGACACTCCAAGCAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGAGGCGTCCATCAATTATCTTACGTTCGTGGGGAGTCAAGATTCTCGGATCATAGACCAGTTTATAGCATGTTTCTGGCAGAAGTTGAGTCTGTTAGCCGTAACCGAATAAAGAAATGCTCTAGCTGCTCCAGCTCAAGGATTGAAGTAGAAGAGTTGTTGCCTCAGTCACACGGTTACAGTTACACTGATTTGAGTTTCTTCTGA 1812 0.4426 MSHLRFLSFLGFSYSPKHDHVKNRGVPCPSHFVVFLSSLLPVSKLYEVVLTMRDENSKKSKLSWPKTLVKKWFNIKSKNEDFQADDVLHAGVNGEWRSNYSQREEYTIKKSKPERAKKRHSDRMRRGKIDLDAAPVTDNYRIFAATWNVAGKSPPSYLSLEDWLHSSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTTSPLPDPIVELDADFEGSMRQKATSFFHRRSFQSLSHSMRVDNDMSLPQAACLDRRLSVCDRMMFGHRTSDYDPSYRWCSSDDENGPGDSPVATHYSPMTYRGCFSMEDRDRQTGQSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFVCSHLTSGQKEGDELRRNSDVMEILRKTRFPRVHGIGDDSSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHNWKLHIEQRQGRVFEGWNEGRIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGVHQLSYVRGESRFSDHRPVYSMFLAEVESVSRNRIKKCSSCSSSRIEVEELLPQSHGYSYTDLSFF 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0835 603 SUPERFAMILY DNase I-like 129 577 IPR036691 -
Aed8g0835 603 SMART i5p_5 275 568 IPR000300 GO:0016791|GO:0046856
Aed8g0835 603 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 54 599 IPR045849 GO:0004445|GO:0046855
Aed8g0835 603 Gene3D Endonuclease/exonuclease/phosphatase 310 588 IPR036691 -
Aed8g0835 603 Gene3D Endonuclease/exonuclease/phosphatase 129 260 IPR036691 -
Aed8g0835 603 Pfam Endonuclease/Exonuclease/phosphatase family 145 553 IPR005135 GO:0003824
Aed8g0835 603 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 54 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0835 Aed-Chr8 7058439 7061708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0835 337 567 Acyl Lipid Metabolism Gene Families AT1G65580 27.798 4.30e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0835 - - gmx:100797409 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0835 8 7058439 7061708 Aed8g0835 8 7058439 7061708 ECH
Aed4g0244 4 1769332 1772232 Aed8g0835 8 7058439 7061708 PCT