Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0244 ATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTTTTGGCCGAAATCATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGATTTTCAGGCAGATGATGTTCTCTCCCAAGGTGTTGATGAAGAGTGTAGCAGCAACTACTCAGAAAGGGAGGCATGCACCATCAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCAGACAGAATGCGAGGAGGTAAGAATGAACTTGATGAAGCTCAGGTTACAGATGTGTATAACTATAGAATCTTTGCTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAGCCTTGAAGATTGGCTTCACACATCTCCACCTGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTGCCTCTTAATGCTGGTAATGTTTTGGGAACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATTAGGAGGACACTGAACAACCTTCCAGGAACAAGTGGCGGATGCCACACTCCTTCACCCCTCCCTAATCCTATTGTAGAGCTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGGCAACTTCTTTCTTCCAACGAAGATCCTTCCAATCCTTGAGCCGTAGTATGAGAATTGATAACGATATGTTCATGCCCCAAGCTTGTCTTGATCGCCGTTTCAGTGTCTGTGATAGAGTGATGTTTGGTCACAGAACTAGTGACTATGACCCCAATTATCGGTGGGGTTCCTCGGATGAAGAAAATGGCGCTGGTGACTCACCAATTACAACACAATATTCACCAATGTCATATGGCGGCGGTTGTTTCTTGATGACGGAGGACAGTGACAGACAGACAGGACACTCGAGATACTGCTTGGTTGCTAGTAAGCAAATGGTTGGGGTGTTTCTAACTGTTTGGGTAAAAAGTGATATAAGAGATGATGTTCACAACATGAAAGTTTCTTGTGTTGGCAGAGGGTTGATGGGATATCTTGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCAGCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACTTCTGGACAAAAGGACGGCGATGAGTTACGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCTCCTGTCCATGACATTGGCGATGAGTATTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTGTTAGAAAATGACCAGGCATGTTACTTCTTTGTCCCTTTACATCTGTGTATAGAGCAGAGGCAAGGTCGCGTCTTTGAAGGATGGAATGAAGGGAAAATATATTTCCCTCCAACTTATAAGTATTCGAACAATTCAGACAGATATGCAGGTGATGACAGACGCTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGGGGCCTTCACCAATTATCATATGTTCGCGGTGAGTCAAGATTTTCTGATCATAGGCCAGTTTATAGCATATTCTTGGCAGAAGTTGAGTCTGGTAGCTGTAACCAAATAAAGAAAAGCTCCAGTTCCAGGATTGAAGTAGAAGAGTTGTTTCCACATTCACATGGTTACAGCTACATTGATATGAACTACTTTTGA 1707 0.4253 MRDENSKKSKLFWPKSLVKKWFNIKSKAEDFQADDVLSQGVDEECSSNYSEREACTIRKSKSERSSRWYSDRMRGGKNELDEAQVTDVYNYRIFAATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNNLPGTSGGCHTPSPLPNPIVELDADFEGSMRQKATSFFQRRSFQSLSRSMRIDNDMFMPQACLDRRFSVCDRVMFGHRTSDYDPNYRWGSSDEENGAGDSPITTQYSPMSYGGGCFLMTEDSDRQTGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLQQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPPVHDIGDEYSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWKTLLENDQACYFFVPLHLCIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSIFLAEVESGSCNQIKKSSSSRIEVEELFPHSHGYSYIDMNYF 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0244 568 Pfam Endonuclease/Exonuclease/phosphatase family 96 521 IPR005135 GO:0003824
Aed4g0244 568 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 567 - -
Aed4g0244 568 Gene3D Endonuclease/exonuclease/phosphatase 273 553 IPR036691 -
Aed4g0244 568 Gene3D Endonuclease/exonuclease/phosphatase 71 206 IPR036691 -
Aed4g0244 568 SMART i5p_5 193 536 IPR000300 GO:0016791|GO:0046856
Aed4g0244 568 SUPERFAMILY DNase I-like 84 534 IPR036691 -
Aed4g0244 568 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 567 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0244 Aed-Chr4 1769332 1772232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0244 294 501 Acyl Lipid Metabolism Gene Families AT2G43900 30.172 6.12e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0244 - - gmx:100803074 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0244 4 1769332 1772232 Aed4g0244 4 1769332 1772232 ECH
Aed4g0244 4 1769332 1772232 Aed8g0835 8 7058439 7061708 PCT