Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0816 ATGGAGTTTAGTAAAGTCACTCTTGAGATCTTCTCCAAACTTGAGCACAAATGGCTCTCACATTGTAAAGCCACCAACAAAACCCGCATTCTTAGCATTGACGGCGGAGAAACCACCGCCATTGTCGCCGGCGAAACTCTCATCTACCTCGAGGATCAGATCCGTCTCCACACCTCCGATCCTCACGCTCAGGTAGCAGATTTCTTCGACATCGTCGCCGGCACCGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGGTGACGCCTTCGGCAGGCCGCTATACACCGCCAGAGAAGCCGTCCGTCTCGTCTCGGAGAGAAACTCCGAACTCTACAAGCTCAAATCCGGCGGCATCTTCCGCCGGCGCCGGAGATTCTCCTCCAGCAGCATGGACAACGTGTTGAAGCAAGTGTTCCAGAGAAAGGAGGACGGACGGCTGTTGACCTTGAAGGACACGTGTAAACCGCTCCTCATTCCTTGCTTTGACCTCAAGAGTTCCGCGCCGTTCGTCTTTTCGCGCGCCGACGCGTCCGAGTCTCCGAGCTTCGACTTCGAGCTCTGGAAGGTGTGCCGCGCCACGTCAGCGACGCCGAGCCATTTCAAGCCGTTCGACTTCGCTTCCGTCGACGGAAAGACCTCGTGCTCCGCCGTGGACGGCGGCCTCGTGATGAACAACCCGACGGCGGCCGCCGTGACGCACGTCCTCCACAACAAGCGTGATTTCCCCTCGGTGAACGGCGTGGAGGATCTCCTGGTCCTTTCCTTGGGGAACGGATCTTCCAACGCAAAAGTGTACGAGAGTCGCACGTGCTCCACGCCGTCGGTGGTTGACATTGTCCTCGACGGTGTTTCCGAGACCATTGACCAGATGTTGGGGAACGCCTTCTGCTGGAACCGTACGGACTACGTCAGAATCCAGGCGTTCGGTTTGGGAAGTGAAGCAATGAAGAAGGATGAGGTTCTCAAAGAGAGGGGACTCGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACTAACGGAAACAGAATAGATAGCTTCGCGCAACGTCTTGTTGCTACCGGAAAACCAAGCCCGCCGTCTAGTCCCTGCAAGGATTCCGCCGTCAACCCTCCTCTCGCTAACGGCCGCTAG 1143 0.5757 MEFSKVTLEIFSKLEHKWLSHCKATNKTRILSIDGGETTAIVAGETLIYLEDQIRLHTSDPHAQVADFFDIVAGTGIGAILAAMITAGDAFGRPLYTAREAVRLVSERNSELYKLKSGGIFRRRRRFSSSSMDNVLKQVFQRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSHFKPFDFASVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSSNAKVYESRTCSTPSVVDIVLDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGSEAMKKDEVLKERGLESLPFGGKRLLTETNGNRIDSFAQRLVATGKPSPPSSPCKDSAVNPPLANGR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0816 380 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
Aed8g0816 380 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Aed8g0816 380 MobiDBLite consensus disorder prediction 356 380 - -
Aed8g0816 380 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 380 - -
Aed8g0816 380 SUPERFAMILY FabD/lysophospholipase-like 26 319 IPR016035 -
Aed8g0816 380 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Aed8g0816 380 PANTHER PATATIN-LIKE PROTEIN 6 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0816 Aed-Chr8 6933018 6934812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0816 1 380 Acyl Lipid Metabolism Gene Families AT3G63200 70.466 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0816 - - gmx:100795441 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0816 8 6933018 6934812 Aed8g0816 8 6933018 6934812 ECH
Aed4g0279 4 1987458 1989480 Aed8g0816 8 6933018 6934812 PCT