Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0279 ATGGAGCTTAGCAAAGTGACGCTAGAGATCTTCTCCAAACTCGAGCAGCAATGGCTCTCGCACTACGAAGCATCAACCAAAACCCGCATTCTCAGCATTGATGGCGGAGGAACCACCGCCATTGTCGCCGCTGCCGCCCTCGTCCACCTCGAGGACCAGATCCGCGCCCATACCTCCGATCCCCACGCGCAAATTGCCGATTACTTCGACATCATCGCCGGCACCGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGACGATGGCTTCGGAAGGCCTCTCTACTCCGCCAGAGAAGCCGTCCGCTTCGTCGCCGAAAACAACTGCAAACTCTACAAGCCGAAGCGCGGCGGCGTGTTCCGCCGACGCCGGAGATTCTCCGCGAGTAGCATGGAAAACGCGCTGAAGCGCGTTTTCAAGAGAAAAGAGGGAGAAGAACGGTTGTTGACTCTAAAAGACACGTGTAAGCCGCTCCTTATCCCTTGCTTTGACCTCAAAAGCTCTGCGCCATTCGTGTTCTCCCGAGCCGACGCGTCTGAGTCACCGAGTTTCAACTTCGAGCTTTGGAAGGCGTGCCGCGCCACGTCAGCGACGCCTGGCCTCTTCGCGCCCTTCCACTTCGCCTCCGTCGACGGAAAGACTTCCTGCGCCGCCGTTGACGGCGGCTTAGTGATGAACAATCCGGCAGCGGCGGCCGTCACGCACGTCCTCCACAACAAGCGCGACTTCCCGTCGGTGAACGGAGTGGAGGATCTCTTGGTTCTGTCCATCGGAAACGGAGCGCCTGCGAAGAGAATGAACAACGCCGGCGAGTGCTCCACGTCGACGGTGGTTGACATTGCGCTCGACGGCGTTTCCGAGACCATTGACCAGATGCTAGGGAACGCCTTCTGTTGGAACCGTACGGATTATGTCAGGATTCAGGCGTTCGGGTTGGGAGATCAAGGAAAAGAAGAGAAGGTGCTGAACGAGAGAGTGCTGGAATCGTTACCGTTTGGAGGCAAGCGATTACTGCAGGAAACTAACGGTAACAGAATCGAGAGCTTCGTGCAACGTCTTGTTGCAACTGGAAAGACTAGTCTGCCACCTAGTCCGTGCAAGCTTCCGCCGTAA 1116 0.5762 MELSKVTLEIFSKLEQQWLSHYEASTKTRILSIDGGGTTAIVAAAALVHLEDQIRAHTSDPHAQIADYFDIIAGTGIGAILAAMITADDGFGRPLYSAREAVRFVAENNCKLYKPKRGGVFRRRRRFSASSMENALKRVFKRKEGEERLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKACRATSATPGLFAPFHFASVDGKTSCAAVDGGLVMNNPAAAAVTHVLHNKRDFPSVNGVEDLLVLSIGNGAPAKRMNNAGECSTSTVVDIALDGVSETIDQMLGNAFCWNRTDYVRIQAFGLGDQGKEEKVLNERVLESLPFGGKRLLQETNGNRIESFVQRLVATGKTSLPPSPCKLPP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0279 371 CDD Pat17_PNPLA8_PNPLA9_like 30 331 - -
Aed4g0279 371 PANTHER PATATIN 2 371 - -
Aed4g0279 371 PANTHER PATATIN-LIKE PROTEIN 6 2 371 - -
Aed4g0279 371 Gene3D Cytosolic phospholipase A2 catalytic domain 18 362 - -
Aed4g0279 371 SUPERFAMILY FabD/lysophospholipase-like 27 342 IPR016035 -
Aed4g0279 371 Pfam Patatin-like phospholipase 31 233 IPR002641 GO:0006629
Aed4g0279 371 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 234 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0279 Aed-Chr4 1987458 1989480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0279 1 368 Acyl Lipid Metabolism Gene Families AT3G63200 69.786 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0279 - - gmx:100784729 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0279 4 1987458 1989480 Aed4g0279 4 1987458 1989480 ECH
Aed4g0279 4 1987458 1989480 Aed8g0816 8 6933018 6934812 PCT