Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0811 ATGGCCGGCGGTGGCAGAGGAGTTAGAATCGCCGTCGTGGGCGACGGTGGCACTGGAAAATCCACACTGATAGCCGCAATGGCGTCGGAGTCTTTCCCCAAGTCCGTTCCGCCTCTGCTCCCACCCACTCGCTTGCCCCATAATCTCTTCCCCGATTCCGTTCCTCTTACCCTCATTGATACACCTTCCAGCTTCGCAAAACAACGCAACGAAGAATTGAAGCTTGCTGATGCGGTGGTTTTAACCTATGCTTGTGATGAACCGGTGAGCTTTGAGCGTGTGAGTAATTACTGGCTCCCTGAACTGCAGAAGTTGGAGGTGAAGGCACCTGTGATTGTGGTTGGTTGCAAGCTTGACATGCGAGATGAAAAACAGCTAGTGAGCTTAGAGAGTCTCACCACTCACATAATGAAACAGTTCACTGAAGTCCCTCAAGTTTTTTATTTTGCCCAAAAAGCAGTACTGCATCCAGTAGATCCATTGTTTGATTATAAAAGACATTCTTTAACAGATCGATGTGTGAGGGCATTAAGAAGAATATTTATTCTTTGTGATCATGACATGGATGGTGAGCTTAATGATGAAGAATTGAATGAATTTCAGGTTAGATGCTTCAATGCACCATTGCAGCCATCTGAAATAGCATCAGTCAAAACAATTGTACAGCAGAAAGTACCTGAAGGAGTCAACTCTATTGGTCTTACCTTTCCAGGGTTTATTTATGTCCATAACATGTTTCTAAAGAAAGGGCGAACAGAGACATTGTGGGCTGTTCTAAGAAAGTTTGGATATGACAATGATTTAAAACTCCGGGATGATTTCCTTCCAGTTCCATCTAAGCAGGCTTCTGATCAGGATCGATCCCTGCAACCTGCTGAAGTTGATAAGCTATTTGATACTGCTCCGGAAAGTCCATGGAATGATGCTCCATATAAGGATGCAGCAGAGAAAACTGATATGGGCTATATCTCTCTGAATGGCTTTTTGTCTCAGTGGGCCCTCATGACTTTACTTGATCCACAACGTAGCTTGGCTAATTTGATTTACATTGGATATAGTGGTAATCCTGCTGCAGCACTCCGTGTCACTCGTAGAAGATCAGTAGATCGCAAGAAGCAAACAACAGAAAGAAATGTGTTCCAATGCTATGTTTTTGGTTCTAAACATGCTGGGAAATCTGCTTTGCTGTATTCATTACTGGGAAGGCCTTTCTCAAATAATTATACTCCAACAACAGTTGAGCAGTACGCGGCAAATGTCTTTGAACTAAAAGGGGTAAGGAAAATTCTCATACTGCGCGAGATACCTGAGGATGGATTGTTGGAATTTTTGTCAAATCAGGATTGTTTGGCTACATGTGATGTAGCTGTTTTTGTGTATGACAGCTCAGATGAATATTCATGGAAGAAATGCAGAGGTTTGCTTGAGAAGGTTGTTAGACAAGGAGAACTAACTGGTCATAGAATCCCTTGCCTCCTTATCGCTGCTAAGGATGATTTAACTCCATTCCCAAGGACGGTACTAGATTCAGTTAAGGTTTCTCAGGAAATGGGAATAAAGGCACCTATTCACGTAAGTATGAAATTAGGCGATTCGAGTAATGTGTATAATAAAATTGTTAATGCAGCAGAACACCCTCATTTGAGCATTCCAGAAACTGAGATCGCACGGAGAAAGAAGCAACACCACCAGCTTCTTCATCACTCTCTTATTTTTGCCTTAGTTGGGGCTGCTATGGCGGTTGCTGGTTTGACAGCTTGTCGTGTGCGTGCAGTGAAGAAGAATACTACTACTTAA 1797 0.4302 MAGGGRGVRIAVVGDGGTGKSTLIAAMASESFPKSVPPLLPPTRLPHNLFPDSVPLTLIDTPSSFAKQRNEELKLADAVVLTYACDEPVSFERVSNYWLPELQKLEVKAPVIVVGCKLDMRDEKQLVSLESLTTHIMKQFTEVPQVFYFAQKAVLHPVDPLFDYKRHSLTDRCVRALRRIFILCDHDMDGELNDEELNEFQVRCFNAPLQPSEIASVKTIVQQKVPEGVNSIGLTFPGFIYVHNMFLKKGRTETLWAVLRKFGYDNDLKLRDDFLPVPSKQASDQDRSLQPAEVDKLFDTAPESPWNDAPYKDAAEKTDMGYISLNGFLSQWALMTLLDPQRSLANLIYIGYSGNPAAALRVTRRRSVDRKKQTTERNVFQCYVFGSKHAGKSALLYSLLGRPFSNNYTPTTVEQYAANVFELKGVRKILILREIPEDGLLEFLSNQDCLATCDVAVFVYDSSDEYSWKKCRGLLEKVVRQGELTGHRIPCLLIAAKDDLTPFPRTVLDSVKVSQEMGIKAPIHVSMKLGDSSNVYNKIVNAAEHPHLSIPETEIARRKKQHHQLLHHSLIFALVGAAMAVAGLTACRVRAVKKNTTT 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0811 598 Gene3D - 279 436 - -
Aed8g0811 598 Gene3D - 442 543 IPR027417 -
Aed8g0811 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 550 IPR027417 -
Aed8g0811 598 SMART rho_sub_3 10 157 IPR001806 GO:0003924|GO:0005525
Aed8g0811 598 Gene3D - 5 159 IPR027417 -
Aed8g0811 598 PANTHER RHO FAMILY GTPASE 2 444 IPR003578 GO:0005525|GO:0007264
Aed8g0811 598 Pfam Ras family 10 130 IPR001806 GO:0003924|GO:0005525
Aed8g0811 598 Pfam Ras family 384 516 IPR001806 GO:0003924|GO:0005525
Aed8g0811 598 ProSitePatterns EF-hand calcium-binding domain. 185 197 IPR018247 -
Aed8g0811 598 Pfam EF hand associated 208 285 IPR013567 -
Aed8g0811 598 SMART rab_sub_5 8 157 - -
Aed8g0811 598 PIRSF Miro 5 285 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0007005|GO:0031307
Aed8g0811 598 PIRSF Miro 279 598 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0007005|GO:0031307
Aed8g0811 598 PRINTS Transforming protein P21 ras signature 8 29 - -
Aed8g0811 598 PRINTS Transforming protein P21 ras signature 107 120 - -
Aed8g0811 598 Pfam EF hand associated 306 373 IPR013566 -
Aed8g0811 598 ProSiteProfiles Miro domain profile. 377 545 IPR020860 GO:0003924|GO:0005525
Aed8g0811 598 PANTHER MITOCHONDRIAL RHO GTPASE 2 444 - -
Aed8g0811 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 189 IPR027417 -
Aed8g0811 598 SUPERFAMILY EF-hand 160 333 IPR011992 -
Aed8g0811 598 Gene3D - 164 268 - -
Aed8g0811 598 CDD Miro2 376 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0811 Aed-Chr8 6881308 6888317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0811 2 595 EF-hand Containing Proteins AT3G63150 54.732 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0811 K07870 - gmx:100806983 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0288 4 2061614 2068435 Aed8g0811 8 6881308 6888317 PCT