Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0797 ATGCCTGTGCTTGCGGCTATGTTCTCCAAAACCAAAAAAACCCACACTTTCACTCTGAACGCGAGATCAATATCAAGCCTGAAAGTAGTGTGGCGAAAGGACCAATCACTCGACCGAGCCATAGAGCTCGACAAGCGCTACAAGCAATGCGCCCGCGTGGTCAAAGAAGTCCTCAACGAGCCAGGCCAAGCCATCCCACTCCGCTACCTCGAAAAGCGCCGCGAGCGCATGCGCCTCAAGCTCAAAGCCGAAACCTTTCTCACCCAAAACCCCGGTTTATTCGACATCTACCTCGACCGCATCAAACCCAAAACCGAACCGGTCCGCTTCCTCCGCCCCTCCGACCGCCTCCGCCACTTCCTCCAAGAGGAGCACCACATCTTCCGCGACAACGAGCCCTTCATCGTCTCCAAGCTCTGCAAACTGCTAATGATGTCGAAGCACAACGTTGTCAGCGCCGACAAGCTGCTCCACGTGAAGAGGGAGTTCGGATTCCCCAATGATTTTTTAGTCGACTTGGTTCCCAGGTATCCGGAATATTTTAGGTTAACCGGATCTCCTGGTGAAGGTAAATCGTTTCTGGAGCTGGTTAATTGGAACCCCGAGTTCGCAAAATCTGTAATTGAGAAAAGGGCTGAAGGGGAAAGTGAGCGTTTGGGGATTAGGGTTAGGCCCAACTTCAATATGGACCTTCCAGCGGGGTTTGTGTTGAAGAAGGAGATGAGGGAATGGGTTAGGGATTGGATGGAGCTTGATTACGTGTCCCCTTATGAGGATGTGTCACATTTGGACCAGGCTTCTAGAGAAATGGAGAAGAGGTCCGTTGGAGTGTTCCATGAACTGCTTTCACTTTCCTTGTACAAGAGGGTACCTGTGCCGATTCTCGGCAAGTTTTGCGACGAGTATAGATTCTCGAACGCGTTCTCGACCACTTTTACTAGGCATTCGGGGATATTCTATCTGTCTTTGAAAGGCGGCATTGAGACGGCGGTGTTGAGGGAGGCGTACAGAGGCGATGAGCTGATTGACCGAGATCCGCTGCTTCGGATAAGGGATAAGTTTGTTGAGTTGTTGGAGGAAGGGTGGAGGCATAGGGCAGAGCAGTTGAGGTTGAAGCAGGAGAAGATTAGGGAAGATATGGAGCTATTGGCTACGAAAAAAAATGGAATGTTGCCTCTTAGGAATCTGTTATTGAAAAAGGCTTCAGTGACAAGTGTTTGGCTTAGTGATATGTCTTGGGATTATTTTCTCCCAATGTTTGCATTGCTGAGAACTGAACTGAAGAGAGAAAAAGAGATACAAAATGAGACGAGTCAAGATTTTCAATTTAATAACTCTAGCTTTGACATTTCTAGCATTTGTGCCAAAAATGGAGAGCCAAATCATCCCACCAATCATTCCCTTTCCACCACCATCTCTTCACCCACTTTGTTTATCCCAACTAGCACTAGTAAACTATGCTTGTGCAATGTTGCCTTTCTCCACCGCCACATTCACCACTTGTACCTCCACCCTCGCTGCTGTCATCACCTCCTGATGTTGGCGGACACAGTAGTGACTAAATCCATGGCCAACACCACAACTCTCAAGAAGAAAACTGTTGCCGGTGGGCTAGGGAAATGGACAACCAATGTGTATGTGAATTCCTACTTCTATTGCCTCCCTTCCTCATTAGACCTGTGCATCAGTACTCAATCAGCATTGGAGAATCGTGTAATGTCACTTACTCATGTGGTGGGCCAATATGATTAA 1752 0.4823 MPVLAAMFSKTKKTHTFTLNARSISSLKVVWRKDQSLDRAIELDKRYKQCARVVKEVLNEPGQAIPLRYLEKRRERMRLKLKAETFLTQNPGLFDIYLDRIKPKTEPVRFLRPSDRLRHFLQEEHHIFRDNEPFIVSKLCKLLMMSKHNVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGSPGEGKSFLELVNWNPEFAKSVIEKRAEGESERLGIRVRPNFNMDLPAGFVLKKEMREWVRDWMELDYVSPYEDVSHLDQASREMEKRSVGVFHELLSLSLYKRVPVPILGKFCDEYRFSNAFSTTFTRHSGIFYLSLKGGIETAVLREAYRGDELIDRDPLLRIRDKFVELLEEGWRHRAEQLRLKQEKIREDMELLATKKNGMLPLRNLLLKKASVTSVWLSDMSWDYFLPMFALLRTELKREKEIQNETSQDFQFNNSSFDISSICAKNGEPNHPTNHSLSTTISSPTLFIPTSTSKLCLCNVAFLHRHIHHLYLHPRCCHHLLMLADTVVTKSMANTTTLKKKTVAGGLGKWTTNVYVNSYFYCLPSSLDLCISTQSALENRVMSLTHVVGQYD 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0797 583 Pfam Plant organelle RNA recognition domain 33 362 IPR021099 GO:0003723
Aed8g0797 583 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 10 386 IPR045040 GO:0003723
Aed8g0797 583 Coils Coil 366 386 - -
Aed8g0797 583 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 10 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0797 Aed-Chr8 6796865 6799396 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0797 - - gmx:100778092 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0797 8 6796865 6799396 Aed8g0797 8 6796865 6799396 ECH
Aed2g2147 2 25483274 25484423 Aed8g0797 8 6796865 6799396 PCT