Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2147 ATGAACAAAAATGGCGTTATTCCATCGTGGATGAAGCAGCAATGGCGGGGCATAGTGAAAGTGCGTTTGAAATGGGTCAAGAATCGAACCCTAGACCACGTCATCGACAAGGAAACCGATCTCAAAGCCGCGTGCCTCCTCAAGGACGCCGTGAACCGCTCCTCCACCGGCTTCCTCACCGCGAAATCCATCGCCGATTGGCAAAAACTTCTCGGCCTCACCGTCCCGGTCCTCCGATTCCTCCGCCGCTACCCAATTCTCTTCCGCCTCACTGACACCACACTCTTCCTACACTCCCAGGAACTCGCAATCCACAAAACCCACCAAACCGGCACCGTCAAGAGGCTCTCGAAGCTCCTCATGATGGCCAACTCACGCACCCTCTCCCTCCACTCCCTCCACGCGCTCAAGTGGGACCTCGGCTTGCCCGACACCTTTGACAAAGCCCTCGTCCCGCAGTTCCCCCACGACTTCCAATTCGTCAAGTCCCCCAACGGCGTCGTTTCGCTTAAGCTATCTCGGTGGCCCGAAGAACTCGCGGTTTCCGCGTTGCAGAAGAGCAACGAGGGTGGGACCCACTACCGTGAGTTCAAGGGTGGACAATCGGCGCTGGCTTTTTCGATGCGTGTAAAACCACTACGGTTACTCTCAAAGGAAGGGTACCAGAGTGGGAAGCTAGTGGACCCACACCCTCTTGCTCGCCATAGAGATAAGTTCTACCATGTCATGCAGACGGGGCTGCTTTATCGCGGCGATGGATCATTGAAACCTCAGCAGAACGATGAACTGAGGAGTGAGCACTCTGAAAAGGAGAAAGAGGTTGAAACGAGTGATGAACTACTCTGCGAGAGTGAAACAGATGAATGA 867 0.549 MNKNGVIPSWMKQQWRGIVKVRLKWVKNRTLDHVIDKETDLKAACLLKDAVNRSSTGFLTAKSIADWQKLLGLTVPVLRFLRRYPILFRLTDTTLFLHSQELAIHKTHQTGTVKRLSKLLMMANSRTLSLHSLHALKWDLGLPDTFDKALVPQFPHDFQFVKSPNGVVSLKLSRWPEELAVSALQKSNEGGTHYREFKGGQSALAFSMRVKPLRLLSKEGYQSGKLVDPHPLARHRDKFYHVMQTGLLYRGDGSLKPQQNDELRSEHSEKEKEVETSDELLCESETDE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2147 288 Coils Coil 260 280 - -
Aed2g2147 288 PANTHER OS04G0546100 PROTEIN 11 209 - -
Aed2g2147 288 PANTHER OS04G0546100 PROTEIN 216 286 - -
Aed2g2147 288 MobiDBLite consensus disorder prediction 257 279 - -
Aed2g2147 288 Pfam Plant organelle RNA recognition domain 26 211 IPR021099 GO:0003723
Aed2g2147 288 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 216 286 IPR045040 GO:0003723
Aed2g2147 288 MobiDBLite consensus disorder prediction 250 288 - -
Aed2g2147 288 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 11 209 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2147 Aed-Chr2 25483274 25484423 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2147 - - gmx:100808403 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2147 2 25483274 25484423 Aed8g0797 8 6796865 6799396 PCT