Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0790 ATGGGTAAGATTCTGAGAGAAACCTCGAGGCCGTTCTCGAATTGTTCGTCATCGGCATCTCCGTCATCGGCGCCTCCGGCAACGACGTCATCGACGTCGGTGACCGACACGGTGAGGGGATCGCACCGGTTCAAGATCACGGGGTATTCGCTGTCGAAGGGAATTGGGTTTGGGAAGTACATAGCGTCGGATATATTCTCGGTGGGAGGGTACGATTGGGCGATCTATTTCTACCCCGATGGGAAGAGCGTGGAGGACAATGCTACTTACGTTTCGCTCTTCATCGCGCTCGCTAGCGAAGGGACAGACGTTAGGGCGCTTTTTGAGTTGACGCTTTTGGATCAGAGTGGGAAGGAGAGGCACAAGGTGCATAGCCATTTCGAGAGGACCCTCGAGAGTGGACCTTACACGTTAAAATACCGTGGTAGCATGTGA 435 0.5379 MGKILRETSRPFSNCSSSASPSSAPPATTSSTSVTDTVRGSHRFKITGYSLSKGIGFGKYIASDIFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSM 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0790 144 CDD MATH 40 136 IPR002083 GO:0005515
Aed8g0790 144 MobiDBLite consensus disorder prediction 1 36 - -
Aed8g0790 144 ProSiteProfiles MATH/TRAF domain profile. 39 144 IPR002083 GO:0005515
Aed8g0790 144 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 38 141 IPR008974 GO:0005515
Aed8g0790 144 MobiDBLite consensus disorder prediction 9 36 - -
Aed8g0790 144 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 20 142 - -
Aed8g0790 144 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 20 142 IPR045005 GO:0016567
Aed8g0790 144 SUPERFAMILY TRAF domain-like 36 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0790 Aed-Chr8 6735537 6739488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0790 K10523 - gmx:100811065 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0790 8 6735537 6739488 Aed8g0790 8 6735537 6739488 ECH
Aed4g0310 4 2260500 2264462 Aed8g0790 8 6735537 6739488 PCT